RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 SP3Q02447 781 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 DBPQ10586 325 aaPredicted RBP8.76□□□□□ -1.01
MSH4-201ENST00000263187 SCARB2Q14108 478 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 GRIN2CQ14957 1233 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 SLC5A12Q1EHB4 618 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 IQCCQ4KMZ1 466 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 LYPLAL1Q5VWZ2 237 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 CFAP206Q8IYR0 622 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 DNAJC22Q8N4W6 341 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 AQP11Q8NBQ7 271 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 C11orf65Q8NCR3 313 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 VPS37AQ8NEZ2 397 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 ASZ1Q8WWH4 475 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 MRPS31Q92665 395 aaKnown RBP8.76□□□□□ -1.01
MSH4-201ENST00000263187 VOPP1Q96AW1 172 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 DMRTB1Q96MA1 342 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 FAM129BQ96TA1 746 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 YIPF2Q9BWQ6 316 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 CDADC1Q9BWV3 514 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 ABCG4Q9H172 646 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 FBXO8Q9NRD0 319 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 ASIC5Q9NY37 505 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 DNAJC27Q9NZQ0 273 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 CLEC2DQ9UHP7 191 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 FAM32AQ9Y421 112 aaKnown RBP8.76□□□□□ -1.01
MSH4-201ENST00000263187 PCDHGB1Q9Y5G3 927 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 AGAP5A6NIR3 686 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 WASHC1A8K0Z3 465 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 CCL16O15467 120 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 TEX28O15482 410 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 ABLIM3O94929 683 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 XPAP23025 273 aaPredicted RBP8.76□□□□□ -1.01
MSH4-201ENST00000263187 CST5P28325 142 aaPredicted RBP8.76□□□□□ -1.01
MSH4-201ENST00000263187 NKX3-2P78367 333 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 ELP6Q0PNE2 266 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 MTA1Q13330 715 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 ZMAT1Q5H9K5 638 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 FAHD1Q6P587 224 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 TMEM220Q6QAJ8 160 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 WASH2PQ6VEQ5 465 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 C11orf96Q7Z7L8 435 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 RBM45Q8IUH3 476 aaKnown RBP8.76□□□□□ -1.01
MSH4-201ENST00000263187 TAGAPQ8N103 731 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 OR52E4Q8NGH9 312 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 WDR36Q8NI36 951 aaKnown RBP8.76□□□□□ -1.01
MSH4-201ENST00000263187 WDR20Q8TBZ3 569 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 PHF10Q8WUB8 498 aaKnown RBP8.76□□□□□ -1.01
MSH4-201ENST00000263187 ATL1Q8WXF7 558 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 CLP1Q92989 425 aaKnown RBP8.76□□□□□ -1.01
MSH4-201ENST00000263187 HRASLS5Q96KN8 279 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 IL21Q9HBE4 155 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 PSORS1C1Q9UIG5 152 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 EXO1Q9UQ84 846 aaKnown RBP8.76□□□□□ -1.01
MSH4-201ENST00000263187 RUVBL1Q9Y265 456 aaKnown RBP8.76□□□□□ -1.01
MSH4-201ENST00000263187 DNMT3AQ9Y6K1 912 aaPredicted RBP8.76□□□□□ -1.01
MSH4-201ENST00000263187 CLCA1A8K7I4 914 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 LEFTY2O00292 366 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 KIAA0513O60268 411 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 SOCS5O75159 536 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 NME6O75414 186 aaPredicted RBP8.76□□□□□ -1.01
MSH4-201ENST00000263187 PIK3CBP42338 1070 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 TLE2Q04725 743 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 MTAPQ13126 283 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 DUSP7Q16829 419 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 AGAP7PQ5VUJ5 663 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 LHX8Q68G74 356 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 PAQR6Q6TCH4 344 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 PTCHD4Q6ZW05 846 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 RASGEF1AQ8N9B8 481 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 VPS35Q96QK1 796 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 MRPL9Q9BYD2 267 aaKnown RBP8.76□□□□□ -1.01
MSH4-201ENST00000263187 EHD3Q9NZN3 535 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 BOLA1Q9Y3E2 137 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 HCFC2Q9Y5Z7 792 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 REV3LO60673 3130 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 METTL15A6NJ78 407 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 H3BN98 237 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 GFYI3L273 518 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 K7ESM1 405 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 SGTAO43765 313 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 NUAK1O60285 661 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 GASTP01350 101 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 SEMG1P04279 462 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 IMPA1P29218 277 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 CNR2P34972 360 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 GGT2P36268 569 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 HNMTP50135 292 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 COPZ1P61923 177 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 SELENOWP63302 87 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 LSM11P83369 360 aaKnown RBP eCLIP8.75□□□□□ -1.01
MSH4-201ENST00000263187 SLBPQ14493 270 aaKnown RBP eCLIP8.75□□□□□ -1.01
MSH4-201ENST00000263187 PTGES3Q15185 160 aaKnown RBP8.75□□□□□ -1.01
MSH4-201ENST00000263187 TCEA2Q15560 299 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 CCBE1Q6UXH8 406 aaPredicted RBP8.75□□□□□ -1.01
MSH4-201ENST00000263187 Q6ZNB5 142 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 ARMCX6Q7L4S7 300 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 AKAP14Q86UN6 197 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 TRAPPC5Q8IUR0 188 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 METTL4Q8N3J2 472 aa8.75□□□□□ -1.01
MSH4-201ENST00000263187 IQCF1Q8N6M8 205 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms