RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 OR8K5Q8NH50 307 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 CHTF18Q8WVB6 975 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 GAL3ST3Q96A11 431 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 SMIM10Q96HG1 83 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 TEFMQ96QE5 360 aaKnown RBP23.16■■□□□ 1.3
SCN1B-201ENST00000262631 ELAC2Q9BQ52 826 aaKnown RBP23.16■■□□□ 1.3
SCN1B-201ENST00000262631 LRTM1Q9HBL6 345 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 RIC8BQ9NVN3 520 aa23.16■■□□□ 1.3
SCN1B-201ENST00000262631 DHCR7Q9UBM7 475 aaKnown RBP23.16■■□□□ 1.3
SCN1B-201ENST00000262631 NPIPB8E9PQR5 432 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 SEMA3DO95025 777 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 GBAP04062 536 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 PRR35P0CG20 571 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 IL1RNP18510 177 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 PRPH2P23942 346 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 RAP1GDS1P52306 607 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 KIAA0040Q15053 153 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 AP5B1Q2VPB7 878 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 DEFB134Q4QY38 66 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 C6orf136Q5SQH8 315 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 METTL4Q8N3J2 472 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 SLC38A9Q8NBW4 561 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 WDR36Q8NI36 951 aaKnown RBP23.15■■□□□ 1.3
SCN1B-201ENST00000262631 RGMAQ96B86 450 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 C11orf24Q96F05 449 aaPredicted RBP23.15■■□□□ 1.3
SCN1B-201ENST00000262631 PFDN4Q9NQP4 134 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 PRDM7Q9NQW5 492 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 CUTCQ9NTM9 273 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 C1orf109Q9NX04 203 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 B3GALT1Q9Y5Z6 326 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 SLC22A7Q9Y694 548 aa23.15■■□□□ 1.3
SCN1B-201ENST00000262631 KNTC1P50748 2209 aa23.14■■□□□ 1.3
SCN1B-201ENST00000262631 FOXS1O43638 330 aa23.14■■□□□ 1.29
SCN1B-201ENST00000262631 SEC22BO75396 215 aa23.14■■□□□ 1.29
SCN1B-201ENST00000262631 SCRG1O75711 98 aa23.14■■□□□ 1.29
SCN1B-201ENST00000262631 ALOX12P18054 663 aa23.14■■□□□ 1.29
SCN1B-201ENST00000262631 BSGP35613 385 aa23.14■■□□□ 1.29
SCN1B-201ENST00000262631 PUM1Q14671 1186 aaKnown RBP eCLIP23.14■■□□□ 1.29
SCN1B-201ENST00000262631 ATP6AP1LQ52LC2 224 aa23.14■■□□□ 1.29
SCN1B-201ENST00000262631 TRIM40Q6P9F5 258 aa23.14■■□□□ 1.29
SCN1B-201ENST00000262631 ABHD13Q7L211 337 aa23.14■■□□□ 1.29
SCN1B-201ENST00000262631 COMMD6Q7Z4G1 85 aa23.14■■□□□ 1.29
SCN1B-201ENST00000262631 TMEM126BQ8IUX1 230 aa23.14■■□□□ 1.29
SCN1B-201ENST00000262631 SHISA5Q8N114 240 aa23.14■■□□□ 1.29
SCN1B-201ENST00000262631 TTC29Q8NA56 475 aaPredicted RBP23.14■■□□□ 1.29
SCN1B-201ENST00000262631 KCNC2Q96PR1 638 aa23.14■■□□□ 1.29
SCN1B-201ENST00000262631 CENPKQ9BS16 269 aa23.14■■□□□ 1.29
SCN1B-201ENST00000262631 NDC1Q9BTX1 674 aa23.14■■□□□ 1.29
SCN1B-201ENST00000262631 TMEM120AQ9BXJ8 343 aa23.14■■□□□ 1.29
SCN1B-201ENST00000262631 NMRK1Q9NWW6 199 aa23.14■■□□□ 1.29
SCN1B-201ENST00000262631 KLHL14Q9P2G3 628 aa23.14■■□□□ 1.29
SCN1B-201ENST00000262631 URADA6NGE7 173 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 EEDO75530 441 aaKnown RBP23.13■■□□□ 1.29
SCN1B-201ENST00000262631 ZNF28P17035 718 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 EMP3P54852 163 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 RAE1P78406 368 aaKnown RBP23.13■■□□□ 1.29
SCN1B-201ENST00000262631 BTN3A2P78410 334 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 LSM12Q3MHD2 195 aaKnown RBP23.13■■□□□ 1.29
SCN1B-201ENST00000262631 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.13■■□□□ 1.29
SCN1B-201ENST00000262631 GARNL3Q5VVW2 1013 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 OR4C11Q6IEV9 310 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 TTLL10Q6ZVT0 673 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 BPHLQ86WA6 291 aaPredicted RBP23.13■■□□□ 1.29
SCN1B-201ENST00000262631 METTL27Q8N6F8 245 aaPredicted RBP23.13■■□□□ 1.29
SCN1B-201ENST00000262631 OR9A4Q8NGU2 314 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 CCT8L2Q96SF2 557 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 SIKE1Q9BRV8 207 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 PTPRBP23467 1997 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 A0A0A6YYC8 382 aaPredicted RBP23.13■■□□□ 1.29
SCN1B-201ENST00000262631 ZNF860A6NHJ4 632 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 SRRM3A6NNA2 597 aaPredicted RBP23.13■■□□□ 1.29
SCN1B-201ENST00000262631 I3L1I5 382 aaPredicted RBP23.13■■□□□ 1.29
SCN1B-201ENST00000262631 DNAJB6O75190 326 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 NTRK1P04629 796 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 RPL38P63173 70 aaKnown RBP23.13■■□□□ 1.29
SCN1B-201ENST00000262631 MUM1Q2TAK8 710 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 NXNQ6DKJ4 435 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 CYB5D1Q6P9G0 228 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 ZFAND4Q86XD8 727 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 PPP3R2Q96LZ3 170 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 QRFPRQ96P65 431 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 NSRP1Q9H0G5 558 aaKnown RBP23.13■■□□□ 1.29
SCN1B-201ENST00000262631 ACTR5Q9H9F9 607 aaPredicted RBP23.13■■□□□ 1.29
SCN1B-201ENST00000262631 NAALAD2Q9Y3Q0 740 aa23.13■■□□□ 1.29
SCN1B-201ENST00000262631 TMEM184BQ9Y519 407 aaPredicted RBP23.13■■□□□ 1.29
SCN1B-201ENST00000262631 POLR3HQ9Y535 204 aaPredicted RBP23.13■■□□□ 1.29
SCN1B-201ENST00000262631 KLHL18O94889 574 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 KLK1P06870 262 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 ALAS2P22557 587 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 CERS1P27544 350 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 HOXD11P31277 338 aaPredicted RBP23.12■■□□□ 1.29
SCN1B-201ENST00000262631 SSR2P43308 183 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 RAB15P59190 212 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 ACSM2AQ08AH3 577 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 FAM53BQ14153 422 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 HERC3Q15034 1050 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 NDUFA9Q16795 377 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 FAM214AQ32MH5 1076 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 SPIN4Q56A73 249 aa23.12■■□□□ 1.29
SCN1B-201ENST00000262631 DCAF12Q5T6F0 453 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms