RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 TNNI3P19429 210 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 HMGCLP35914 325 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 RAB15P59190 212 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 SSX1Q16384 188 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 RNASE12Q5GAN4 147 aaKnown RBP12.49□□□□□ -0.41
SNX1-201ENST00000261889 FRG2Q64ET8 278 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 NCEH1Q6PIU2 408 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 PTCHD4Q6ZW05 846 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 OR6F1Q8NGZ6 308 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 FRG2BQ96QU4 278 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 IL20RAQ9UHF4 553 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 TDRD15B5MCY1 1934 aaKnown RBP12.49□□□□□ -0.41
SNX1-201ENST00000261889 EFCAB10A6NFE3 127 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 CLCA1A8K7I4 914 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 WNT9AO14904 365 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 SH3BP5O60239 455 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 AP2A2O94973 939 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 ANXA4P09525 319 aaPredicted RBP12.49□□□□□ -0.41
SNX1-201ENST00000261889 AMD1P17707 334 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 ELP6Q0PNE2 266 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 SMUG1Q53HV7 270 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 GPRC6AQ5T6X5 926 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 LILRB4Q8NHJ6 448 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 TP53INP1Q96A56 240 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 C7orf34Q96L11 122 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 ASPNQ9BXN1 380 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 MMP27Q9H306 513 aa12.49□□□□□ -0.41
SNX1-201ENST00000261889 PLXNA4Q9HCM2 1894 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 CACNA1CQ13936 2221 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 SPTBN5Q9NRC6 3674 aaKnown RBP12.48□□□□□ -0.41
SNX1-201ENST00000261889 FNDC1Q4ZHG4 1894 aaPredicted RBP12.48□□□□□ -0.41
SNX1-201ENST00000261889 DYTNA2CJ06 578 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 HYAL3O43820 417 aaPredicted RBP12.48□□□□□ -0.41
SNX1-201ENST00000261889 ENTPD6O75354 484 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 SCO1O75880 301 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 ALPPL2P10696 532 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 PEPDP12955 493 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 CBLP22681 906 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 UGT2B15P54855 530 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 HBA1P69905 142 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 STARD3Q14849 445 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 PTGES3Q15185 160 aaKnown RBP12.48□□□□□ -0.41
SNX1-201ENST00000261889 DUOXA1Q1HG43 343 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 AGAP6Q5VW22 663 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 ERAP2Q6P179 960 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 ZNF517Q6ZMY9 492 aaPredicted RBP12.48□□□□□ -0.41
SNX1-201ENST00000261889 RNF130Q86XS8 419 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 PIH1D2Q8WWB5 315 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 CEP295NLQ96MC4 621 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 AGAP4Q96P64 663 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 DUSP26Q9BV47 211 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 ZDHHC6Q9H6R6 413 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 RTCAO00442 366 aaKnown RBP12.48□□□□□ -0.41
SNX1-201ENST00000261889 SEMA3DO95025 777 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 CDK1P06493 297 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 EBLN1P0CF75 366 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 ACRV1P26436 265 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 SLC11A1P49279 550 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 PRIM2P49643 509 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 CDH4P55283 916 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 DOC2AQ14183 400 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 SYCE2Q6PIF2 218 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 TRIM46Q7Z4K8 759 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 TAGAPQ8N103 731 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 ZNF740Q8NDX6 193 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 GPATCH2Q9NW75 528 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 SH2B3Q9UQQ2 575 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 REV3LO60673 3130 aa12.48□□□□□ -0.41
SNX1-201ENST00000261889 TMEM229AB2RXF0 380 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 GASTP01350 101 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 HIST1H2AGP0C0S8 130 aaPredicted RBP12.47□□□□□ -0.41
SNX1-201ENST00000261889 HIST1H2ADP20671 130 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 S100A1P23297 94 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 AOAHP28039 575 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 HTR7P34969 479 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 MAGEA2P43356 314 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 HTR3AP46098 478 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 RFX2P48378 723 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 BCL2L1Q07817 233 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 KEAP1Q14145 624 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 C22orf42Q6IC83 251 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 FAM131AQ6UXB0 335 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 EIF3MQ7L2H7 374 aaKnown RBP12.47□□□□□ -0.41
SNX1-201ENST00000261889 CACUL1Q86Y37 369 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 SORCS1Q8WY21 1168 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 USP7Q93009 1102 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 OTULINQ96BN8 352 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 HIST1H2AHQ96KK5 128 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 C8orf48Q96LL4 319 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 HIST1H2AJQ99878 128 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 H2AFJQ9BTM1 129 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 ABCG4Q9H172 646 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 SLC32A1Q9H598 525 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 CPNE5Q9HCH3 593 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 GPR52Q9Y2T5 361 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 OAZ2O95190 189 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 LHCGRP22888 699 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 PAX3P23760 479 aa12.47□□□□□ -0.41
SNX1-201ENST00000261889 HNRNPFP52597 415 aaKnown RBP12.47□□□□□ -0.41
SNX1-201ENST00000261889 MGAT3Q09327 533 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms