RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 CETN2P41208 172 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 CLDN17P56750 224 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 SLC26A5P58743 744 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 FOLH1Q04609 750 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 KLHL30Q0D2K2 578 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 HYAL1Q12794 435 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 TRDNQ13061 729 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 NFE2L1Q14494 772 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 TRADDQ15628 312 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 SMU1Q2TAY7 513 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 KBTBD12Q3ZCT8 623 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 CEP55Q53EZ4 464 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 GFI1BQ5VTD9 330 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 FAM46CQ5VWP2 391 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 OR4C11Q6IEV9 310 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 PWWP2BQ6NUJ5 590 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 ADAM5Q6NVV9 412 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 FIP1L1Q6UN15 594 aaKnown RBP3.85□□□□□ -1.79
CCDC54-201ENST00000261058 MYOCDQ8IZQ8 938 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 ZBTB44Q8NCP5 570 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 GPRC5AQ8NFJ5 357 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 OR52K2Q8NGK3 314 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 KRT35Q92764 455 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 RUNDC3BQ96NL0 473 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 TSSK2Q96PF2 358 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 GSDMAQ96QA5 445 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 KRT12Q99456 494 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 NKX3-1Q99801 234 aaPredicted RBP3.85□□□□□ -1.79
CCDC54-201ENST00000261058 TDRD1Q9BXT4 1180 aaKnown RBP3.85□□□□□ -1.79
CCDC54-201ENST00000261058 TEX13BQ9BXU2 312 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 BARHL1Q9BZE3 327 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 LSG1Q9H089 658 aaKnown RBP3.85□□□□□ -1.79
CCDC54-201ENST00000261058 NCOR1P1Q9H4R4 102 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 RPAP3Q9H6T3 665 aaPredicted RBP3.85□□□□□ -1.79
CCDC54-201ENST00000261058 C10orf88Q9H8K7 445 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 DNAJC17Q9NVM6 304 aaKnown RBP3.85□□□□□ -1.79
CCDC54-201ENST00000261058 TAS2R3Q9NYW6 316 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 C6orf203Q9P0P8 240 aaPredicted RBP3.85□□□□□ -1.79
CCDC54-201ENST00000261058 SEPT10Q9P0V9 454 aa3.85□□□□□ -1.79
CCDC54-201ENST00000261058 RUVBL2Q9Y230 463 aaKnown RBP3.85□□□□□ -1.79
CCDC54-201ENST00000261058 CFAP65Q6ZU64 1925 aaKnown RBP3.84□□□□□ -1.79
CCDC54-201ENST00000261058 MYH15Q9Y2K3 1946 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 A0A1W2PR80 420 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 KRT87PA6NCN2 255 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 CCDC169A6NNP5 214 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 KBTBD13C9JR72 458 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 ZG16O60844 167 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 OLFM2O95897 454 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 RPL35AP18077 110 aaKnown RBP3.84□□□□□ -1.79
CCDC54-201ENST00000261058 IL4RP24394 825 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 CCND3P30281 292 aaPredicted RBP3.84□□□□□ -1.79
CCDC54-201ENST00000261058 SLC12A3P55017 1021 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 ASIC1P78348 528 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 ZNF789Q5FWF6 425 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 CASC4Q6P4E1 433 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 SLC24A5Q71RS6 500 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 HOOK3Q86VS8 718 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 HDDC3Q8N4P3 179 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 GBP7Q8N8V2 638 aaPredicted RBP3.84□□□□□ -1.79
CCDC54-201ENST00000261058 WDSUB1Q8N9V3 476 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 ADAD2Q8NCV1 583 aaKnown RBP3.84□□□□□ -1.79
CCDC54-201ENST00000261058 SMAP2Q8WU79 429 aaPredicted RBP3.84□□□□□ -1.79
CCDC54-201ENST00000261058 FAM218AQ96MZ4 157 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 ALKBH7Q9BT30 221 aaPredicted RBP3.84□□□□□ -1.79
CCDC54-201ENST00000261058 THAP9Q9H5L6 903 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 C5orf66Q9H5L9 145 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 MRPL17Q9NRX2 175 aaKnown RBP3.84□□□□□ -1.79
CCDC54-201ENST00000261058 PLCXD1Q9NUJ7 323 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 TXLNGQ9NUQ3 528 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 PANK4Q9NVE7 773 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 TBC1D13Q9NVG8 400 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 AIPL1Q9NZN9 384 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 ZMAT5Q9UDW3 170 aaKnown RBP3.84□□□□□ -1.79
CCDC54-201ENST00000261058 CACNG5Q9UF02 275 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 HPCAL4Q9UM19 191 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 ITM2BQ9Y287 266 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 HBS1LQ9Y450 684 aaKnown RBP3.84□□□□□ -1.79
CCDC54-201ENST00000261058 AP1M2Q9Y6Q5 423 aa3.84□□□□□ -1.79
CCDC54-201ENST00000261058 DDX49Q9Y6V7 483 aaKnown RBP3.84□□□□□ -1.79
CCDC54-201ENST00000261058 SPATA31D1Q6ZQQ2 1576 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 H3BMM5 538 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 BOLA2-SMG1P6H3BVE0 249 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 SLC33A1O00400 549 aaPredicted RBP3.83□□□□□ -1.8
CCDC54-201ENST00000261058 PGRMC2O15173 223 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 TSC22D2O75157 780 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 CEACAM4O75871 244 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 DLATP10515 647 aaKnown RBP3.83□□□□□ -1.8
CCDC54-201ENST00000261058 MYOGP15173 224 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 ELAVL4P26378 380 aaKnown RBP3.83□□□□□ -1.8
CCDC54-201ENST00000261058 OR3A3P47888 321 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 NPBWR1P48145 328 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 PAX9P55771 341 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 DCDC1P59894 354 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 KRTAP10-7P60409 375 aaPredicted RBP3.83□□□□□ -1.8
CCDC54-201ENST00000261058 CBX3Q13185 183 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 SGCGQ13326 291 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 HNRNPDQ14103 355 aaKnown RBP3.83□□□□□ -1.8
CCDC54-201ENST00000261058 TAB1Q15750 504 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 PODNL1Q6PEZ8 512 aa3.83□□□□□ -1.8
CCDC54-201ENST00000261058 Q6ZRP5 223 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms