RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 LHX1P48742 406 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 BLOC1S1P78537 153 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 PMP22Q01453 160 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 SRSF11Q05519 484 aaKnown RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 PLA2G7Q13093 441 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 ORC2Q13416 577 aaPredicted RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 FGFBP1Q14512 234 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 GPR19Q15760 415 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 AMHR2Q16671 573 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 TSTD2Q5T7W7 516 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 XAF1Q6GPH4 301 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 SLC22A25Q6T423 547 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 CYHR1Q6ZMK1 362 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 QSOX2Q6ZRP7 698 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 CHMP1BQ7LBR1 199 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 SHFQ7M4L6 423 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 DDX53Q86TM3 631 aaKnown RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 CCDC24Q8N4L8 307 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 ATPAF2Q8N5M1 289 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 MCFD2Q8NI22 146 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 DYNC2LI1Q8TCX1 351 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 ACSF2Q96CM8 615 aaPredicted RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 LRRC46Q96FV0 321 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 ABHD17AQ96GS6 310 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 FAM210BQ96KR6 192 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 SIGLEC10Q96LC7 697 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 EBNA1BP2Q99848 306 aaKnown RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 SPXQ9BT56 116 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 NOL11Q9H8H0 719 aaKnown RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 MANSC1Q9H8J5 431 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 VAT1LQ9HCJ6 419 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 NECTIN3Q9NQS3 549 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 TRMT13Q9NUP7 481 aaKnown RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 KCNK4Q9NYG8 393 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 GCNT4Q9P109 453 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 COLQQ9Y215 455 aaPredicted RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 RGPD8O14715 1765 aaPredicted RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 CYB5R3P00387 301 aaPredicted RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 HLA-DMAP28067 261 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 MCM7P33993 719 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 LIPAP38571 399 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 DGKEP52429 567 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 GPC5P78333 572 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 FAM189BP81408 668 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 NHLH1Q02575 133 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 ELAVL2Q12926 359 aaKnown RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 ZNF211Q13398 564 aaPredicted RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 FAM83EQ2M2I3 478 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 SOWAHAQ2M3V2 549 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 RNASE10Q5GAN6 216 aaKnown RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 HAGHLQ6PII5 290 aaPredicted RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 PRSS57Q6UWY2 283 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 TAF8Q7Z7C8 310 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 CYP4Z1Q86W10 505 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 ZNF654Q8IZM8 581 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 SPATA22Q8NHS9 363 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 NDNFQ8TB73 568 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 UBASH3BQ8TF42 649 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 TCTEX1D2Q8WW35 142 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 NT5C3BQ969T7 300 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 ZNF479Q96JC4 524 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 SORCS2Q96PQ0 1159 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 DMRTA2Q96SC8 542 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 ACO2Q99798 780 aaKnown RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 EBF4Q9BQW3 602 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 ZNF2Q9BSG1 426 aaPredicted RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 REPIN1Q9BWE0 567 aaKnown RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 JAM3Q9BX67 310 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 ELOVL4Q9GZR5 314 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 SLIRPQ9GZT3 109 aaKnown RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 ING2Q9H160 280 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 TMPRSS5Q9H3S3 457 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 ECHDC1Q9NTX5 307 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 FBXO34Q9NWN3 711 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 BABAM1Q9NWV8 329 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 TMEM260Q9NX78 707 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 MED11Q9P086 117 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 NCAPD2Q15021 1401 aa7.47□□□□□ -1.21
GPNMB-201ENST00000258733 MYO5AQ9Y4I1 1855 aaKnown RBP7.47□□□□□ -1.21
GPNMB-201ENST00000258733 FAM237BA0A1B0GVD1 139 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 SLC5A10A0PJK1 596 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 MYMKA6NI61 221 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 TSTD3H0UI37 97 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 GMFGO60234 142 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 WDR47O94967 919 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 TTC4O95801 387 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 SERPING1P05155 500 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 CRYBA1P05813 215 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 C1SP09871 688 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 EFNA1P20827 205 aaPredicted RBP7.46□□□□□ -1.21
GPNMB-201ENST00000258733 HSD11B1P28845 292 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 RPS19P39019 145 aaKnown RBP7.46□□□□□ -1.21
GPNMB-201ENST00000258733 NME5P56597 212 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 RAB5BP61020 215 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 GTF2BQ00403 316 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 TNFRSF17Q02223 184 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 CACNB1Q02641 598 aaPredicted RBP7.46□□□□□ -1.21
GPNMB-201ENST00000258733 KCNH2Q12809 1159 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 MAPK7Q13164 816 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms