RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 PROX1Q92786 737 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 MED8Q96G25 268 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 HIST1H2AHQ96KK5 128 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 KCNC2Q96PR1 638 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 DEPDC7Q96QD5 511 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 PKP4Q99569 1192 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 HIST1H2AJQ99878 128 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 FAM83CQ9BQN1 747 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 H2AFJQ9BTM1 129 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 RNF167Q9H6Y7 350 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 ZBTB20Q9HC78 741 aaPredicted RBP9.72□□□□□ -0.85
COPB1-201ENST00000249923 KRT84Q9NSB2 600 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 EHD3Q9NZN3 535 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 ACSL6Q9UKU0 697 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 ERVW-1Q9UQF0 538 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 AP3M1Q9Y2T2 418 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 PCYT1BQ9Y5K3 369 aaPredicted RBP9.72□□□□□ -0.85
COPB1-201ENST00000249923 H0YIV9 168 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 J3KTA2 159 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 RFPL2O75678 378 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 SOD1P00441 154 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 URODP06132 367 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 ZNF8P17098 575 aaPredicted RBP9.72□□□□□ -0.85
COPB1-201ENST00000249923 RRM2P31350 389 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 AP1S2P56377 157 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 CXCR4P61073 352 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 HBA1P69905 142 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 LRRC74AQ0VAA2 488 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 IER5LQ5T953 404 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 LIPJQ5W064 366 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 TSPYL5Q86VY4 417 aaPredicted RBP9.72□□□□□ -0.85
COPB1-201ENST00000249923 CHTF18Q8WVB6 975 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 CIDECQ96AQ7 238 aaPredicted RBP9.72□□□□□ -0.85
COPB1-201ENST00000249923 ZNF558Q96NG5 402 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 NIPSNAP1Q9BPW8 284 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 DUSP26Q9BV47 211 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 GABARAPL3Q9BY60 117 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 RAPGEFL1Q9UHV5 662 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 LSM7Q9UK45 103 aaKnown RBP9.72□□□□□ -0.85
COPB1-201ENST00000249923 LYVE1Q9Y5Y7 322 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 TCF20Q9UGU0 1960 aaKnown RBP9.72□□□□□ -0.85
COPB1-201ENST00000249923 TMEM221A6NGB7 291 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 SLC16A5O15375 505 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 ETFAP13804 333 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 TGM1P22735 817 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 LIMK1P53667 647 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 SRSF11Q05519 484 aaKnown RBP9.72□□□□□ -0.85
COPB1-201ENST00000249923 E2F2Q14209 437 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 GRIN2CQ14957 1233 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 GRHL2Q6ISB3 625 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 GDPD4Q6W3E5 623 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 SZRD1Q7Z422 152 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 ELMOD1Q8N336 334 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 HRASLS5Q96KN8 279 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 NECTIN4Q96NY8 510 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 MROQ9BYG7 248 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 FBXO8Q9NRD0 319 aa9.72□□□□□ -0.85
COPB1-201ENST00000249923 FAM120CQ9NX05 1096 aaKnown RBP9.72□□□□□ -0.85
COPB1-201ENST00000249923 KIF26AQ9ULI4 1882 aaPredicted RBP9.72□□□□□ -0.85
COPB1-201ENST00000249923 SLC5A10A0PJK1 596 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 K7ESM1 405 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 SAP18O00422 153 aaKnown RBP9.71□□□□□ -0.85
COPB1-201ENST00000249923 AQP9O43315 295 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 DNAJB5O75953 348 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 POP4O95707 220 aaKnown RBP9.71□□□□□ -0.85
COPB1-201ENST00000249923 TIMP2P16035 220 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 CD36P16671 472 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 GABRB1P18505 474 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 CYP2A7P20853 494 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 MAPK1P28482 360 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 OPRD1P41143 372 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 VEZF1Q14119 521 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 PROX2Q3B8N5 592 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 INAVAQ3KP66 663 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 LILRA6Q6PI73 481 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 CAMKMTQ7Z624 323 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 OR4C15Q8NGM1 316 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 OR6Q1Q8NGQ2 317 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 COQ8BQ96D53 544 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 HHIPL1Q96JK4 782 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 FEVQ99581 238 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 OSGIN1Q9UJX0 560 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 OGDHLQ9ULD0 1010 aa9.71□□□□□ -0.85
COPB1-201ENST00000249923 FAM32AQ9Y421 112 aaKnown RBP9.71□□□□□ -0.85
COPB1-201ENST00000249923 EVPLLA8MZ36 301 aa9.71□□□□□ -0.86
COPB1-201ENST00000249923 WASH3PC4AMC7 463 aa9.71□□□□□ -0.86
COPB1-201ENST00000249923 UGDHO60701 494 aa9.71□□□□□ -0.86
COPB1-201ENST00000249923 TNFRSF21O75509 655 aa9.71□□□□□ -0.86
COPB1-201ENST00000249923 RPS13P62277 151 aaKnown RBP9.71□□□□□ -0.86
COPB1-201ENST00000249923 MEF2AQ02078 507 aaPredicted RBP9.71□□□□□ -0.86
COPB1-201ENST00000249923 TECPR1Q7Z6L1 1165 aa9.71□□□□□ -0.86
COPB1-201ENST00000249923 OR56A3Q8NH54 315 aa9.71□□□□□ -0.86
COPB1-201ENST00000249923 MRPS31Q92665 395 aaKnown RBP9.71□□□□□ -0.86
COPB1-201ENST00000249923 FAM83DQ9H4H8 585 aa9.71□□□□□ -0.86
COPB1-201ENST00000249923 SGK2Q9HBY8 427 aa9.71□□□□□ -0.86
COPB1-201ENST00000249923 NECTIN3Q9NQS3 549 aa9.71□□□□□ -0.86
COPB1-201ENST00000249923 RAD18Q9NS91 495 aa9.71□□□□□ -0.86
COPB1-201ENST00000249923 TAS2R16Q9NYV7 291 aa9.71□□□□□ -0.86
COPB1-201ENST00000249923 PADI2Q9Y2J8 665 aa9.71□□□□□ -0.86
COPB1-201ENST00000249923 TESMINQ9Y4I5 508 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms