RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 ADNP2Q6IQ32 1131 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 TMEM214Q6NUQ4 689 aaKnown RBP12.33□□□□□ -0.44
LSM8-201ENST00000249299 ABHD17CQ6PCB6 329 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 CCDC121Q6ZUS5 278 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 USP53Q70EK8 1073 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 NUDT13Q86X67 352 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 PLD3Q8IV08 490 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 C1orf52Q8N6N3 182 aaKnown RBP12.33□□□□□ -0.44
LSM8-201ENST00000249299 NATD1Q8N6N6 113 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 CSNK1A1LQ8N752 337 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.33□□□□□ -0.443e-46■■■■■ 39.2
LSM8-201ENST00000249299 TESCQ96BS2 214 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 MTERF3Q96E29 417 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 PRR11Q96HE9 360 aaPredicted RBP12.33□□□□□ -0.44
LSM8-201ENST00000249299 SMIM10Q96HG1 83 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 NSL1Q96IY1 281 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 PPM1MQ96MI6 270 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 TMEM74Q96NL1 305 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 F2RL3Q96RI0 385 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 ZBTB18Q99592 522 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 SLC25A23Q9BV35 468 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 MRPL1Q9BYD6 325 aaKnown RBP12.33□□□□□ -0.44
LSM8-201ENST00000249299 MYNNQ9NPC7 610 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 TAGLN3Q9UI15 199 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 KLHL20Q9Y2M5 609 aa12.33□□□□□ -0.44
LSM8-201ENST00000249299 GOLGA4Q13439 2230 aaKnown RBP12.32□□□□□ -0.44
LSM8-201ENST00000249299 ARHGAP10A1A4S6 786 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 FAM234BA2RU67 622 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 BBIP1A8MTZ0 92 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 PLPP1O14494 284 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 SH3BP5O60239 455 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 PCDH7O60245 1069 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 TBX19O60806 448 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 ANXA4P09525 319 aaPredicted RBP12.32□□□□□ -0.44
LSM8-201ENST00000249299 G6PDP11413 515 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 SDC1P18827 310 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 HIST1H1TP22492 207 aaPredicted RBP12.32□□□□□ -0.44
LSM8-201ENST00000249299 PIK3R1P27986 724 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 HNRNPH1P31943 449 aaKnown RBP12.32□□□□□ -0.44
LSM8-201ENST00000249299 CYP4F2P78329 520 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 SRSF11Q05519 484 aaKnown RBP12.32□□□□□ -0.44
LSM8-201ENST00000249299 ZFP36L1Q07352 338 aaKnown RBP12.32□□□□□ -0.44
LSM8-201ENST00000249299 CYP4F3Q08477 520 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 LRRC74AQ0VAA2 488 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 STX5Q13190 355 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 RCAN2Q14206 197 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 LACTB2Q53H82 288 aaPredicted RBP12.32□□□□□ -0.44
LSM8-201ENST00000249299 BLOC1S3Q6QNY0 202 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 MSANTD1Q6ZTZ1 278 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 R3HCC1LQ7Z5L2 792 aaKnown RBP12.32□□□□□ -0.44
LSM8-201ENST00000249299 CAMKMTQ7Z624 323 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 PIP4P1Q86T03 277 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 LIX1Q8N485 282 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 PROKR1Q8TCW9 393 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 MVB12AQ96EY5 273 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 PRPF18Q99633 342 aaKnown RBP12.32□□□□□ -0.44
LSM8-201ENST00000249299 NUDT22Q9BRQ3 303 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 NPLQ9BXD5 320 aaPredicted RBP12.32□□□□□ -0.44
LSM8-201ENST00000249299 ZNF717Q9BY31 904 aaPredicted RBP12.32□□□□□ -0.44
LSM8-201ENST00000249299 ZMYND15Q9H091 742 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 FANCEQ9HB96 536 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 PRM3Q9NNZ6 103 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 FAM60AQ9NP50 221 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 PARD6AQ9NPB6 346 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 TXLNGQ9NUQ3 528 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 SOHLH2Q9NX45 425 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 ARMCX1Q9P291 453 aa12.32□□□□□ -0.44
LSM8-201ENST00000249299 MUC6Q6W4X9 2439 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 C4orf47A7E2U8 309 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 D6RAR5 112 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 ERI3O43414 337 aaKnown RBP12.31□□□□□ -0.44
LSM8-201ENST00000249299 KIF1CO43896 1103 aaKnown RBP12.31□□□□□ -0.44
LSM8-201ENST00000249299 NRP2O60462 931 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 KIAA0754O94854 1291 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 UNC5CO95185 931 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 NPPAP01160 153 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 IL6P05231 212 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 SERPIND1P05546 499 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 MYF5P13349 255 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 ALOX12P18054 663 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 CCKBRP32239 447 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 MTTPP55157 894 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 RAE1P78406 368 aaKnown RBP12.31□□□□□ -0.44
LSM8-201ENST00000249299 CYLC2Q14093 348 aaPredicted RBP12.31□□□□□ -0.44
LSM8-201ENST00000249299 UBAP2LQ14157 1087 aaKnown RBP12.31□□□□□ -0.44
LSM8-201ENST00000249299 SPIDRQ14159 915 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 GRM7Q14831 915 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 SLC9A5Q14940 896 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 HEPACAMQ14CZ8 416 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 FAM214AQ32MH5 1076 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 TOR1AIP1Q5JTV8 583 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 WASHC2DQ5SRD0 308 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 FRMPD2BQ6IN97 320 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 TLDC1Q6P9B6 456 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 ZNF574Q6ZN55 896 aaPredicted RBP12.31□□□□□ -0.44
LSM8-201ENST00000249299 UBE3DQ7Z6J8 389 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 SLITRK4Q8IW52 837 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 RIMKLAQ8IXN7 391 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 RNF175Q8N4F7 328 aa12.31□□□□□ -0.44
LSM8-201ENST00000249299 ARHGEF39Q8N4T4 335 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms