RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 JAK1P23458 1154 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 VSNL1P62760 191 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 MINDY4Q4G0A6 757 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 VWA5B1Q5TIE3 1220 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 IRAK1BP1Q5VVH5 260 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 TRIM40Q6P9F5 258 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 OR2L5Q8NG80 312 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 PEX11GQ96HA9 241 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 NUDT9Q9BW91 350 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 NPLQ9BXD5 320 aaPredicted RBP22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 VN1R1Q9GZP7 353 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 REXO4Q9GZR2 422 aaKnown RBP22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 ACTR8Q9H981 624 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 TBK1Q9UHD2 729 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 TSC22D4Q9Y3Q8 395 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 PCDHGA11Q9Y5H2 935 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 NSG1A0A0A6YYJ2 146 aa22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 ZNF860A6NHJ4 632 aa22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 CHST10O43529 356 aa22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 TAC1P20366 129 aa22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 ITGA3P26006 1051 aa22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 AP2B1P63010 937 aa22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 GOLGA7Q7Z5G4 137 aa22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 VN1R5Q7Z5H4 357 aa22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 PTRH1Q86Y79 214 aaKnown RBP22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 TEX19Q8NA77 164 aa22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 PLPP5Q8NEB5 264 aa22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 OR5T3Q8NGG3 340 aa22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 MZB1Q8WU39 189 aa22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 TBC1D20Q96BZ9 403 aa22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 REPS1Q96D71 796 aa22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 PHF21BQ96EK2 531 aa22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 IPPKQ9H8X2 491 aa22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 RIC8BQ9NVN3 520 aa22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 DCDC2Q9UHG0 476 aa22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 TNRC6AQ8NDV7 1962 aaKnown RBP22.98■■□□□ 1.27
SDF2L1-201ENST00000248958 K7EM74 188 aa22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 ERI3O43414 337 aaKnown RBP22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 SUV39H1O43463 412 aa22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 DPM1O60762 260 aa22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 JRKO75564 520 aa22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 SIX3O95343 332 aaPredicted RBP22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 SHBGP04278 402 aa22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 FHP07954 510 aa22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 COX6A1P12074 109 aa22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 NR1D1P20393 614 aa22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 EEF1DP29692 281 aaKnown RBP22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 HNRNPH1P31943 449 aaKnown RBP22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 PHEXP78562 749 aa22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 EMBQ6PCB8 327 aa22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 ATG14Q6ZNE5 492 aa22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 OR7G3Q8NG95 312 aa22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 ZNF473Q8WTR7 871 aaKnown RBP22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 C8orf44Q96CB5 159 aa22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 ROGDIQ9GZN7 287 aa22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 AICDAQ9GZX7 198 aa22.97■■□□□ 1.27
SDF2L1-201ENST00000248958 GCN1Q92616 2671 aaKnown RBP22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 IGHV1-45A0A0A0MS14 117 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 PSMD12O00232 456 aaPredicted RBP22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 PDGFAP04085 211 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 PCNAP12004 261 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 RNH1P13489 461 aaKnown RBP22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 ICAM2P13598 275 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 HSD17B3P37058 310 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 BTN3A2P78410 334 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 TMEM35AQ53FP2 167 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 FAAH2Q6GMR7 532 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 CHSY3Q70JA7 882 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 TMEM151AQ8N4L1 468 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 L3MBTL4Q8NA19 623 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 ADAMTS18Q8TE60 1221 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 TM9SF4Q92544 642 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 ATP6V1E2Q96A05 226 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 CMTM7Q96FZ5 175 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 MAGEB10Q96LZ2 347 aaPredicted RBP22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 SERINC2Q96SA4 455 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 TUBB6Q9BUF5 446 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 NTMT1Q9BV86 223 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 MS4A8Q9BY19 250 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 LHPPQ9H008 270 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 ZNF700Q9H0M5 742 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 ZNF552Q9H707 407 aaPredicted RBP22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 ZNF160Q9HCG1 818 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 PRM3Q9NNZ6 103 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 LANCL2Q9NS86 450 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 TMEM216Q9P0N5 145 aa22.96■■□□□ 1.27
SDF2L1-201ENST00000248958 LRRC14BA6NHZ5 514 aa22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 MAGEB17A8MXT2 336 aa22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 H0YIV9 168 aa22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 B3GALT2O43825 422 aa22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 CDH16O75309 829 aa22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 TBX6O95947 436 aaPredicted RBP22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 B3GALT4O96024 378 aa22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 PYGBP11216 843 aa22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 PIK3CBP42338 1070 aa22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 OLR1P78380 273 aa22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 EEF1A2Q05639 463 aaKnown RBP22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 ABHD17CQ6PCB6 329 aa22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 RIPOR1Q6ZS17 1223 aa22.95■■□□□ 1.26
SDF2L1-201ENST00000248958 CPEB2Q7Z5Q1 589 aaKnown RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms