RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 PRIM2P49643 509 aa24.51■■□□□ 1.51
RAB40C-201ENST00000248139 SLC5A12Q1EHB4 618 aa24.51■■□□□ 1.51
RAB40C-201ENST00000248139 EPYCQ99645 322 aa24.51■■□□□ 1.51
RAB40C-201ENST00000248139 PITX2Q99697 317 aa24.51■■□□□ 1.51
RAB40C-201ENST00000248139 FAM227AF5H4B4 570 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 ATP6V1G1O75348 118 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 SCARB2Q14108 478 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 PLPP4Q5VZY2 271 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 TRMT11Q7Z4G4 463 aaKnown RBP24.5■■□□□ 1.51
RAB40C-201ENST00000248139 PLD3Q8IV08 490 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 FOPNLQ96NB1 174 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 M0R082 166 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 PCDH17O14917 1159 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 FKTNO75072 461 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 HOXB6P17509 224 aaKnown RBP24.5■■□□□ 1.51
RAB40C-201ENST00000248139 GRK5P34947 590 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 DCDC1P59894 354 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 RPS26P62854 115 aaKnown RBP24.5■■□□□ 1.51
RAB40C-201ENST00000248139 HTRA3P83110 453 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 SPIN4Q56A73 249 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 ZNF805Q5CZA5 627 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 TCEAL5Q5H9L2 206 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 ANXA8L1Q5VT79 327 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 NIPAL1Q6NVV3 410 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 SVOPQ8N4V2 548 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 OR6Q1Q8NGQ2 317 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 SLIRPQ9GZT3 109 aaKnown RBP24.5■■□□□ 1.51
RAB40C-201ENST00000248139 REEP4Q9H6H4 257 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 B3GNT3Q9Y2A9 372 aa24.5■■□□□ 1.51
RAB40C-201ENST00000248139 PCYT1BQ9Y5K3 369 aaPredicted RBP24.5■■□□□ 1.51
RAB40C-201ENST00000248139 ANTXRLA6NF34 631 aa24.49■■□□□ 1.51
RAB40C-201ENST00000248139 STSP08842 583 aa24.49■■□□□ 1.51
RAB40C-201ENST00000248139 PORP16435 677 aaPredicted RBP24.49■■□□□ 1.51
RAB40C-201ENST00000248139 CLK1P49759 484 aaKnown RBP24.49■■□□□ 1.51
RAB40C-201ENST00000248139 HNRNPFP52597 415 aaKnown RBP24.49■■□□□ 1.51
RAB40C-201ENST00000248139 CBX3Q13185 183 aa24.49■■□□□ 1.51
RAB40C-201ENST00000248139 OXA1LQ15070 435 aa24.49■■□□□ 1.51
RAB40C-201ENST00000248139 CCDC149Q6ZUS6 474 aa24.49■■□□□ 1.51
RAB40C-201ENST00000248139 LGI4Q8N135 537 aa24.49■■□□□ 1.51
RAB40C-201ENST00000248139 CPA6Q8N4T0 437 aa24.49■■□□□ 1.51
RAB40C-201ENST00000248139 ZHX1-C8orf76Q96EF9 292 aa24.49■■□□□ 1.51
RAB40C-201ENST00000248139 VMP1Q96GC9 406 aa24.49■■□□□ 1.51
RAB40C-201ENST00000248139 PADI2Q9Y2J8 665 aa24.49■■□□□ 1.51
RAB40C-201ENST00000248139 PRAMEF33A0A0G2JMD5 474 aa24.49■■□□□ 1.51
RAB40C-201ENST00000248139 PRAMEF10O60809 474 aa24.49■■□□□ 1.51
RAB40C-201ENST00000248139 TNFRSF21O75509 655 aa24.49■■□□□ 1.51
RAB40C-201ENST00000248139 GADD45AP24522 165 aa24.49■■□□□ 1.51
RAB40C-201ENST00000248139 MNX1P50219 401 aaPredicted RBP24.49■■□□□ 1.51
RAB40C-201ENST00000248139 ZNF763Q0D2J5 394 aa24.49■■□□□ 1.51
RAB40C-201ENST00000248139 GGHQ92820 318 aa24.49■■□□□ 1.51
RAB40C-201ENST00000248139 POP5Q969H6 163 aaKnown RBP24.49■■□□□ 1.51
RAB40C-201ENST00000248139 MAGEB10Q96LZ2 347 aaPredicted RBP24.49■■□□□ 1.51
RAB40C-201ENST00000248139 SIGLEC11Q96RL6 698 aa24.49■■□□□ 1.51
RAB40C-201ENST00000248139 ZNF282Q9UDV7 671 aaPredicted RBP24.49■■□□□ 1.51
RAB40C-201ENST00000248139 PLXND1Q9Y4D7 1925 aa24.49■■□□□ 1.51
RAB40C-201ENST00000248139 MMP12P39900 470 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 NNMTP40261 264 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 KCNC4Q03721 635 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 DSG4Q86SJ6 1040 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 SLC44A2Q8IWA5 706 aaPredicted RBP24.48■■□□□ 1.51
RAB40C-201ENST00000248139 RAB23Q9ULC3 237 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 OGDHLQ9ULD0 1010 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 SNX8Q9Y5X2 465 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 PLXNA2O75051 1894 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 LOC100506127A0A0U1RQW1 187 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 PIPSLA2A3N6 862 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 RNASET2O00584 256 aaKnown RBP24.48■■□□□ 1.51
RAB40C-201ENST00000248139 SERPINB7O75635 380 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 RHOP08100 348 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 CCL5P13501 91 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 CHI3L1P36222 383 aaPredicted RBP24.48■■□□□ 1.51
RAB40C-201ENST00000248139 HIST2H2ACQ16777 129 aaPredicted RBP24.48■■□□□ 1.51
RAB40C-201ENST00000248139 C16orf78Q8WTQ4 265 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 TIFAQ96CG3 184 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 ROGDIQ9GZN7 287 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 EPS8L2Q9H6S3 715 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 KIAA1671Q9BY89 1806 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 RTCAO00442 366 aaKnown RBP24.48■■□□□ 1.51
RAB40C-201ENST00000248139 C21orf58P58505 322 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 C12orf40Q86WS4 652 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 PSMA8Q8TAA3 256 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 PPCDCQ96CD2 204 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 LRRC3BQ96PB8 259 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 WDR12Q9GZL7 423 aaKnown RBP24.48■■□□□ 1.51
RAB40C-201ENST00000248139 DCSTAMPQ9H295 470 aa24.48■■□□□ 1.51
RAB40C-201ENST00000248139 KPNA4O00629 521 aaPredicted RBP24.47■■□□□ 1.51
RAB40C-201ENST00000248139 SOD1P00441 154 aa24.47■■□□□ 1.51
RAB40C-201ENST00000248139 ADH1AP07327 375 aa24.47■■□□□ 1.51
RAB40C-201ENST00000248139 FURINP09958 794 aa24.47■■□□□ 1.51
RAB40C-201ENST00000248139 HSMCR30P0CW71 290 aa24.47■■□□□ 1.51
RAB40C-201ENST00000248139 DBTP11182 482 aaKnown RBP24.47■■□□□ 1.51
RAB40C-201ENST00000248139 HSD3B1P14060 373 aa24.47■■□□□ 1.51
RAB40C-201ENST00000248139 HSD3B2P26439 372 aa24.47■■□□□ 1.51
RAB40C-201ENST00000248139 GGT2P36268 569 aa24.47■■□□□ 1.51
RAB40C-201ENST00000248139 NFE2L1Q14494 772 aa24.47■■□□□ 1.51
RAB40C-201ENST00000248139 DPPA4Q7L190 304 aa24.47■■□□□ 1.51
RAB40C-201ENST00000248139 TRIM73Q86UV7 250 aa24.47■■□□□ 1.51
RAB40C-201ENST00000248139 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.47■■□□□ 1.519e-13■■■■■ 40.9
RAB40C-201ENST00000248139 GABARAPL3Q9BY60 117 aa24.47■■□□□ 1.51
RAB40C-201ENST00000248139 MROQ9BYG7 248 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms