RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 YPEL5P62699 121 aa22.23■■□□□ 1.15
MSX2-201ENST00000239243 ADRM1Q16186 407 aa22.23■■□□□ 1.15
MSX2-201ENST00000239243 RNF220Q5VTB9 566 aa22.23■■□□□ 1.15
MSX2-201ENST00000239243 OR1E3Q8WZA6 343 aa22.23■■□□□ 1.15
MSX2-201ENST00000239243 PDXPQ96GD0 296 aa22.23■■□□□ 1.15
MSX2-201ENST00000239243 TMEM184CQ9NVA4 438 aa22.23■■□□□ 1.15
MSX2-201ENST00000239243 A0A1W2PRB8 838 aa22.23■■□□□ 1.15
MSX2-201ENST00000239243 CLPTM1O96005 669 aa22.23■■□□□ 1.15
MSX2-201ENST00000239243 DDCP20711 480 aa22.23■■□□□ 1.15
MSX2-201ENST00000239243 IGFBP4P22692 258 aa22.23■■□□□ 1.15
MSX2-201ENST00000239243 AKT2P31751 481 aa22.23■■□□□ 1.15
MSX2-201ENST00000239243 CAPGP40121 348 aa22.23■■□□□ 1.15
MSX2-201ENST00000239243 OTUD3Q5T2D3 398 aaPredicted RBP22.23■■□□□ 1.15
MSX2-201ENST00000239243 STK32CQ86UX6 486 aa22.23■■□□□ 1.15
MSX2-201ENST00000239243 CLEC4FQ8N1N0 589 aa22.23■■□□□ 1.15
MSX2-201ENST00000239243 FAM47BQ8NA70 645 aa22.23■■□□□ 1.15
MSX2-201ENST00000239243 SLC35A5Q9BS91 424 aa22.23■■□□□ 1.15
MSX2-201ENST00000239243 FAF1Q9UNN5 650 aaPredicted RBP22.23■■□□□ 1.15
MSX2-201ENST00000239243 MYRFQ9Y2G1 1151 aa22.23■■□□□ 1.15
MSX2-201ENST00000239243 H0YAE9 185 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 H6PDO95479 791 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 GABRG2P18507 467 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 SHMT2P34897 504 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 FADDQ13158 208 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 LIN52Q52LA3 116 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 C11orf65Q8NCR3 313 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 CYGBQ8WWM9 190 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 CIDECQ96AQ7 238 aaPredicted RBP22.22■■□□□ 1.15
MSX2-201ENST00000239243 BMFQ96LC9 184 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 SORBS1Q9BX66 1292 aaKnown RBP22.22■■□□□ 1.15
MSX2-201ENST00000239243 CD93Q9NPY3 652 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 PCOLCE2Q9UKZ9 415 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 TOR1BO14657 336 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 PRICKLE3O43900 615 aaPredicted RBP22.22■■□□□ 1.15
MSX2-201ENST00000239243 C1QCP02747 245 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 NTRK1P04629 796 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 PCGF2P35227 344 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 EPS8Q12929 822 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 TMEM35AQ53FP2 167 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 CBLL1Q75N03 491 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 EIF3MQ7L2H7 374 aaKnown RBP22.22■■□□□ 1.15
MSX2-201ENST00000239243 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.22■■□□□ 1.15
MSX2-201ENST00000239243 OR52N2Q8NGI0 321 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 RMND5BQ96G75 393 aaPredicted RBP22.22■■□□□ 1.15
MSX2-201ENST00000239243 ZNF764Q96H86 408 aaPredicted RBP22.22■■□□□ 1.15
MSX2-201ENST00000239243 DPH2Q9BQC3 489 aaPredicted RBP22.22■■□□□ 1.15
MSX2-201ENST00000239243 ASPSCR1Q9BZE9 553 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 SLC6A16Q9GZN6 736 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 OR6C2Q9NZP2 312 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 NDUFA13Q9P0J0 144 aa22.22■■□□□ 1.15
MSX2-201ENST00000239243 IGKV1-8A0A0C4DH67 115 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 ALBP02768 609 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 ALPLP05186 524 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 CMPK1P30085 196 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 NUP214P35658 2090 aaPredicted RBP22.21■■□□□ 1.15
MSX2-201ENST00000239243 TRA2BP62995 288 aaKnown RBP22.21■■□□□ 1.15
MSX2-201ENST00000239243 RBBP4Q09028 425 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 MPEG1Q2M385 716 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 TRIM40Q6P9F5 258 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 TBPL2Q6SJ96 375 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 ANGPTL8Q6UXH0 198 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 ZDHHC21Q8IVQ6 265 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 OR5K1Q8NHB7 308 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 TBC1D20Q96BZ9 403 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 SCHIP1Q9P0W5 487 aaPredicted RBP22.21■■□□□ 1.15
MSX2-201ENST00000239243 TBC1D29Q9UFV1 150 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 KRT75O95678 551 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 RPL5P46777 297 aaKnown RBP22.21■■□□□ 1.15
MSX2-201ENST00000239243 CYBRD1Q53TN4 286 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 DDX59Q5T1V6 619 aaKnown RBP eCLIP22.21■■□□□ 1.15
MSX2-201ENST00000239243 OR2L3Q8NG85 312 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 TM4SF18Q96CE8 201 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 IL1RAPQ9NPH3 570 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 TAAR2Q9P1P5 351 aa22.21■■□□□ 1.15
MSX2-201ENST00000239243 BRWD1Q9NSI6 2320 aa22.2■■□□□ 1.14
MSX2-201ENST00000239243 H0Y8X5 98 aa22.2■■□□□ 1.14
MSX2-201ENST00000239243 RTCAO00442 366 aaKnown RBP22.2■■□□□ 1.14
MSX2-201ENST00000239243 MAP3K13O43283 966 aa22.2■■□□□ 1.14
MSX2-201ENST00000239243 LCMT2O60294 686 aaKnown RBP22.2■■□□□ 1.14
MSX2-201ENST00000239243 CRATP43155 626 aa22.2■■□□□ 1.14
MSX2-201ENST00000239243 SMAD4Q13485 552 aaKnown RBP22.2■■□□□ 1.14
MSX2-201ENST00000239243 CREB3L4Q8TEY5 395 aa22.2■■□□□ 1.14
MSX2-201ENST00000239243 RBM4BQ9BQ04 359 aaKnown RBP22.2■■□□□ 1.14
MSX2-201ENST00000239243 RBM4Q9BWF3 364 aaKnown RBP22.2■■□□□ 1.14
MSX2-201ENST00000239243 DDX31Q9H8H2 851 aaKnown RBP22.2■■□□□ 1.14
MSX2-201ENST00000239243 POLMQ9NP87 494 aaPredicted RBP22.2■■□□□ 1.14
MSX2-201ENST00000239243 USE1Q9NZ43 259 aa22.2■■□□□ 1.14
MSX2-201ENST00000239243 UTS2RQ9UKP6 389 aa22.2■■□□□ 1.14
MSX2-201ENST00000239243 BAG5Q9UL15 447 aa22.2■■□□□ 1.14
MSX2-201ENST00000239243 HS3ST3A1Q9Y663 406 aa22.2■■□□□ 1.14
MSX2-201ENST00000239243 H3BNH8 94 aa22.19■■□□□ 1.14
MSX2-201ENST00000239243 SCAMP1O15126 338 aa22.19■■□□□ 1.14
MSX2-201ENST00000239243 E2F6O75461 281 aa22.19■■□□□ 1.14
MSX2-201ENST00000239243 SEMA4FO95754 770 aa22.19■■□□□ 1.14
MSX2-201ENST00000239243 AHRP35869 848 aa22.19■■□□□ 1.14
MSX2-201ENST00000239243 CHI3L1P36222 383 aaPredicted RBP22.19■■□□□ 1.14
MSX2-201ENST00000239243 APOFQ13790 326 aa22.19■■□□□ 1.14
MSX2-201ENST00000239243 RD3Q7Z3Z2 195 aa22.19■■□□□ 1.14
MSX2-201ENST00000239243 HIPK1Q86Z02 1210 aa22.19■■□□□ 1.14
MSX2-201ENST00000239243 NAGSQ8N159 534 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms