RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 PRKCAP17252 672 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 IDSP22304 550 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 CHMP24386 653 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 RAE1P78406 368 aaKnown RBP14.89□□□□□ -0.03
DDX55-201ENST00000238146 SMARCB1Q12824 385 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 FAM26DQ5JW98 314 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 ZNF648Q5T619 568 aaPredicted RBP14.89□□□□□ -0.03
DDX55-201ENST00000238146 ANGPTL8Q6UXH0 198 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 PTCHD4Q6ZW05 846 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 LAX1Q8IWV1 398 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 THSD1Q9NS62 852 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 HCN4Q9Y3Q4 1203 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 NPIPB15A6NHN6 443 aaPredicted RBP14.89□□□□□ -0.03
DDX55-201ENST00000238146 GFYI3L273 518 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 SCG5P05408 212 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 C1SP09871 688 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 XKR6Q5GH73 641 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 LIPJQ5W064 366 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 KRT73Q86Y46 540 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 C1orf52Q8N6N3 182 aaKnown RBP14.89□□□□□ -0.03
DDX55-201ENST00000238146 OR7G1Q8NGA0 311 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 RNF170Q96K19 258 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 SRRQ9GZT4 340 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 MMP28Q9H239 520 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 MARCH5Q9NX47 278 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 FTSJ1Q9UET6 329 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 A0A1W2PQ09 198 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 ZAR1LA6NP61 321 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 TNFRSF21O75509 655 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 ALX3O95076 343 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 ANXA4P09525 319 aaPredicted RBP14.89□□□□□ -0.03
DDX55-201ENST00000238146 CBLP22681 906 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 CNR2P34972 360 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 SOX3P41225 446 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 LIMS1P48059 325 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.89□□□□□ -0.03
DDX55-201ENST00000238146 FOXD4Q12950 439 aaPredicted RBP14.89□□□□□ -0.03
DDX55-201ENST00000238146 ANXA8L1Q5VT79 327 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 ADNP2Q6IQ32 1131 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 RFLNAQ6ZTI6 216 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 OR4A15Q8NGL6 344 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 BHMTQ93088 406 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 MAPKAP1Q9BPZ7 522 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 TIGARQ9NQ88 270 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 CLN6Q9NWW5 311 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 SH3BP4Q9P0V3 963 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 HCSTQ9UBK5 93 aa14.89□□□□□ -0.03
DDX55-201ENST00000238146 TNFRSF10AO00220 468 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 ADAM12O43184 909 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 OR56A5P0C7T3 313 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 TGM4P49221 684 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 DGKEP52429 567 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 CHRNEQ04844 493 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 TAB1Q15750 504 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 SNAP47Q5SQN1 464 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 CRTC1Q6UUV9 634 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 PRSS55Q6UWB4 352 aaPredicted RBP14.88□□□□□ -0.03
DDX55-201ENST00000238146 CAMKMTQ7Z624 323 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 SLC44A2Q8IWA5 706 aaPredicted RBP14.88□□□□□ -0.03
DDX55-201ENST00000238146 APCDD1Q8J025 514 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 COQ8BQ96D53 544 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 TRMT61AQ96FX7 289 aaKnown RBP14.88□□□□□ -0.03
DDX55-201ENST00000238146 MAGEB10Q96LZ2 347 aaPredicted RBP14.88□□□□□ -0.03
DDX55-201ENST00000238146 SNTG1Q9NSN8 517 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 ABCB8Q9NUT2 735 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 ZNF282Q9UDV7 671 aaPredicted RBP14.88□□□□□ -0.03
DDX55-201ENST00000238146 LSM2Q9Y333 95 aaKnown RBP14.88□□□□□ -0.03
DDX55-201ENST00000238146 MAU2Q9Y6X3 613 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 ZNF106Q9H2Y7 1883 aaKnown RBP14.88□□□□□ -0.03
DDX55-201ENST00000238146 BRCA2P51587 3418 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.88□□□□□ -0.03
DDX55-201ENST00000238146 SLC35F4A4IF30 521 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 C2orf78A6NCI8 922 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 SLC10A3P09131 477 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 TRAPPC2P0DI81 140 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 TRAPPC2BP0DI82 140 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 CKMT1AP12532 417 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 CYP2A7P20853 494 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 XCR1P46094 333 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 ASMTP46597 345 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 RORCP51449 518 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 HMGA2P52926 109 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 PSPHP78330 225 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 ZNF33BQ06732 778 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 SCARB2Q14108 478 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 DOC2AQ14183 400 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 GANABQ14697 944 aaKnown RBP14.88□□□□□ -0.03
DDX55-201ENST00000238146 Q5BKY6 102 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 FRMPD2BQ6IN97 320 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 FUT10Q6P4F1 479 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 KLHL17Q6TDP4 642 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 TAS1R1Q7RTX1 841 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 AQP11Q8NBQ7 271 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 GALNT6Q8NCL4 622 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 NFKBIDQ8NI38 313 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 PIP5K1AQ99755 562 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 KLF16Q9BXK1 252 aaPredicted RBP14.88□□□□□ -0.03
DDX55-201ENST00000238146 CLEC2DQ9UHP7 191 aa14.88□□□□□ -0.03
DDX55-201ENST00000238146 ALPK3Q96L96 1907 aa14.87□□□□□ -0.03
DDX55-201ENST00000238146 NT5C1B-RDH14C9J2C7 533 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms