RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 BTBD16Q32M84 506 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 C1orf53Q5VUE5 145 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 TRIQKQ629K1 86 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 DPY19L3Q6ZPD9 716 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 DGLUCYQ7Z3D6 616 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 UMODL1-AS1Q8N2C9 162 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 TP53I13Q8NBR0 393 aaPredicted RBP11.11□□□□□ -0.63
CCND1-201ENST00000227507 TSTD1Q8NFU3 115 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 YIPF6Q96EC8 236 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 ZDHHC4Q9NPG8 344 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 SCN1AP35498 2009 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 BTN3A3O00478 584 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 PLOD3O60568 738 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 SERPINI2O75830 405 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 OTCP00480 354 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 DNAJA1P31689 397 aaKnown RBP11.11□□□□□ -0.63
CCND1-201ENST00000227507 HTR3AP46098 478 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 CCT3P49368 545 aaKnown RBP11.11□□□□□ -0.63
CCND1-201ENST00000227507 PIK3R6Q5UE93 754 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 TIGD4Q8IY51 512 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 HDDC3Q8N4P3 179 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 LRRC20Q8TCA0 184 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 RASSF5Q8WWW0 418 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 PGAP3Q96FM1 320 aaPredicted RBP11.11□□□□□ -0.63
CCND1-201ENST00000227507 MED8Q96G25 268 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 TRMT2BQ96GJ1 504 aaKnown RBP11.11□□□□□ -0.63
CCND1-201ENST00000227507 MCMBPQ9BTE3 642 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 EBPLQ9BY08 206 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 TRIM45Q9H8W5 580 aaPredicted RBP11.11□□□□□ -0.63
CCND1-201ENST00000227507 GDE1Q9NZC3 331 aa11.11□□□□□ -0.63
CCND1-201ENST00000227507 PCM1Q15154 2024 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 DICER1Q9UPY3 1922 aaKnown RBP11.1□□□□□ -0.63
CCND1-201ENST00000227507 PCDHGA12O60330 932 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 ATG13O75143 517 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 SLITRK5O94991 958 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 PAPSS2O95340 614 aaPredicted RBP11.1□□□□□ -0.63
CCND1-201ENST00000227507 PRAMEF1O95521 474 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 TNFRSF1BP20333 461 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 CDC20Q12834 499 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 NFE2L1Q14494 772 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 ZNF57Q68EA5 555 aaPredicted RBP11.1□□□□□ -0.63
CCND1-201ENST00000227507 C22orf39Q6P5X5 142 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 NOXA1Q86UR1 476 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 CYP4Z2PQ8N1L4 340 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 ZNF548Q8NEK5 533 aaPredicted RBP11.1□□□□□ -0.63
CCND1-201ENST00000227507 IGSF8Q969P0 613 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 SPACA7Q96KW9 195 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 INPP5KQ9BT40 448 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 UCK2Q9BZX2 261 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 PRKAB1Q9Y478 270 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 I3L521 148 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 MYOGP15173 224 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 TNFSF8P32971 234 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 NKX3-2P78367 333 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 UAP1L1Q3KQV9 507 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 TIMM50Q3ZCQ8 353 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 SPATS1Q496A3 300 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 RUNDC3AQ59EK9 446 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 ARSIQ5FYB1 569 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 EOGTQ5NDL2 527 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 KIAA0319Q5VV43 1072 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 LAIR2Q6ISS4 152 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 IL17RDQ8NFM7 739 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 OR6F1Q8NGZ6 308 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 IPCEF1Q8WWN9 437 aaPredicted RBP11.1□□□□□ -0.63
CCND1-201ENST00000227507 SNX18Q96RF0 628 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 P2RY13Q9BPV8 354 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 DCAF13Q9NV06 445 aaKnown RBP11.1□□□□□ -0.63
CCND1-201ENST00000227507 ELOVL2Q9NXB9 296 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 ZNF639Q9UID6 485 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 FKBPLQ9UIM3 349 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 ACTL7AQ9Y615 435 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 CASP8AP2Q9UKL3 1982 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 FAM240BA0A1B0GVZ2 78 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 FABP12A6NFH5 140 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 SMLR1H3BR10 107 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 RGS13O14921 159 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 ANXA5P08758 320 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 SLC35G4P0C7Q5 338 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 IL7P13232 177 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 HOXB2P14652 356 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 MYL9P24844 172 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 STC1P52823 247 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 CDH12P55289 794 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 DSTNP60981 165 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 SEMA3BQ13214 749 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 CPZQ66K79 652 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 OR4F3Q6IEY1 312 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 BRAT1Q6PJG6 821 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 LACC1Q8IV20 430 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 OR8H3Q8N146 312 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 BEND7Q8N7W2 519 aaPredicted RBP11.1□□□□□ -0.63
CCND1-201ENST00000227507 GLB1L3Q8NCI6 653 aaPredicted RBP11.1□□□□□ -0.63
CCND1-201ENST00000227507 OR8J3Q8NGG0 315 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 CXorf40BQ96DE9 158 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 CDADC1Q9BWV3 514 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 DUSP21Q9H596 190 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 TMEM30AQ9NV96 361 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 SPASTQ9UBP0 616 aa11.1□□□□□ -0.63
CCND1-201ENST00000227507 PCDHB1Q9Y5F3 818 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms