RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 ENGP17813 658 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 APEX1P27695 318 aaKnown RBP13.56□□□□□ -0.24
SF1-201ENST00000227503 FEN1P39748 380 aaKnown RBP13.56□□□□□ -0.24
SF1-201ENST00000227503 GNPDA1P46926 289 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 MAN2A2P49641 1150 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 AP2S1P53680 142 aaPredicted RBP13.56□□□□□ -0.24
SF1-201ENST00000227503 GPR17Q13304 367 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 CCDC149Q6ZUS6 474 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 OPALINQ96PE5 141 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 NUDT4Q9NZJ9 180 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 TNPO3Q9Y5L0 923 aaKnown RBP13.56□□□□□ -0.24
SF1-201ENST00000227503 J3KTA2 159 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 RGS14O43566 566 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 MYCP01106 439 aaPredicted RBP13.55□□□□□ -0.24
SF1-201ENST00000227503 PDGFAP04085 211 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 TP53P04637 393 aaPredicted RBP13.55□□□□□ -0.24
SF1-201ENST00000227503 NAGAP17050 411 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 M6PRP20645 277 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 ALAS2P22557 587 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 SGSHP51688 502 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 CRYBA2P53672 197 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 ABHD18Q0P651 414 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 DUSP4Q13115 394 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 HNRNPA0Q13151 305 aaKnown RBP13.55□□□□□ -0.24
SF1-201ENST00000227503 PCBP2Q15366 365 aaKnown RBP eCLIP13.55□□□□□ -0.248e-7■■■□□ 18.7
SF1-201ENST00000227503 SLC35F1Q5T1Q4 408 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 CLECL1Q8IZS7 167 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 ATP6V1C2Q8NEY4 427 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 OR52E4Q8NGH9 312 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 FAM193BQ96PV7 902 aaPredicted RBP13.55□□□□□ -0.24
SF1-201ENST00000227503 C1QTNF6Q9BXI9 259 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 P2RY12Q9H244 342 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 YARS2Q9Y2Z4 477 aaKnown RBP13.55□□□□□ -0.24
SF1-201ENST00000227503 LOC102723532A0A0G2JNH3 316 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 LOC730098B7Z3J9 87 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 IFRD1O00458 451 aaPredicted RBP13.55□□□□□ -0.24
SF1-201ENST00000227503 BTN3A3O00478 584 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 ULK1O75385 1050 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 AP2A2O94973 939 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 ALPPP05187 535 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 SRCP12931 536 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 ICAM2P13598 275 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 ZNF157P51786 506 aaPredicted RBP13.55□□□□□ -0.24
SF1-201ENST00000227503 CDH12P55289 794 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 PLET1Q6UQ28 207 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 TMIGD1Q6UXZ0 262 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 ZZZ3Q8IYH5 903 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 ARHGAP39Q9C0H5 1083 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 PPIL3Q9H2H8 161 aaKnown RBP13.55□□□□□ -0.24
SF1-201ENST00000227503 RETREG1Q9H6L5 497 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 CMAHPQ9Y471 501 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 KLK4Q9Y5K2 254 aa13.55□□□□□ -0.24
SF1-201ENST00000227503 H7C0S8 307 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 RFXAPO00287 272 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 STX7O15400 261 aaKnown RBP13.54□□□□□ -0.24
SF1-201ENST00000227503 TAPBPO15533 448 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 KCNK5O95279 499 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 CKBP12277 381 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 ATF6P18850 670 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 CSTF2P33240 577 aaKnown RBP eCLIP13.54□□□□□ -0.24
SF1-201ENST00000227503 CCL23P55773 120 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 RPS14P62263 151 aaKnown RBP13.54□□□□□ -0.24
SF1-201ENST00000227503 VMACQ2NL98 169 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 UAP1L1Q3KQV9 507 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 LIPKQ5VXJ0 399 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 EIF3MQ7L2H7 374 aaKnown RBP13.54□□□□□ -0.24
SF1-201ENST00000227503 TSEN54Q7Z6J9 526 aaKnown RBP13.54□□□□□ -0.24
SF1-201ENST00000227503 PTOV1Q86YD1 416 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 SYT14Q8NB59 555 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 C7orf57Q8NEG2 295 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 SCML1Q9UN30 329 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 SLC38A8A6NNN8 435 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 WASHC1A8K0Z3 465 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 CLIC1O00299 241 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 FFAR2O15552 330 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 MRPS14O60783 128 aaKnown RBP13.54□□□□□ -0.24
SF1-201ENST00000227503 EPN2O95208 641 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 GJB5O95377 273 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 CD160O95971 181 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 DDCP20711 480 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 NUDT1P36639 197 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 PTGER3P43115 390 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 ITGA1P56199 1179 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 CRHR2Q13324 411 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 FBXO43Q4G163 708 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 MPPE1Q53F39 396 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 SBSNQ6UWP8 590 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 ANKS3Q6ZW76 656 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 WDR53Q7Z5U6 358 aaPredicted RBP13.54□□□□□ -0.24
SF1-201ENST00000227503 DENND1CQ8IV53 801 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 OR10G2Q8NGC3 310 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 TTC9Q92623 222 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 UPRTQ96BW1 309 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 KCNH6Q9H252 994 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 TRIM45Q9H8W5 580 aaPredicted RBP13.54□□□□□ -0.24
SF1-201ENST00000227503 ZNF556Q9HAH1 456 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 RHCGQ9UBD6 479 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 DHRS7Q9Y394 339 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 MYO10Q9HD67 2058 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 ALPK3Q96L96 1907 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms