RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 TAB1Q15750 504 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 FAM20CQ8IXL6 584 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 FLCNQ8NFG4 579 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 OR9Q2Q8NGE9 314 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 USP7Q93009 1102 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 CEP295NLQ96MC4 621 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 HERC2P3Q9BVR0 1158 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 TMEM121BQ9BXQ6 578 aaPredicted RBP13.06□□□□□ -0.32
RAB3D-201ENST00000222120 TRIT1Q9H3H1 467 aaKnown RBP13.06□□□□□ -0.32
RAB3D-201ENST00000222120 SLC6A13Q9NSD5 602 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 TPTEP56180 551 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 WDR5P61964 334 aaKnown RBP13.06□□□□□ -0.32
RAB3D-201ENST00000222120 CEP68Q76N32 757 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 POP5Q969H6 163 aaKnown RBP13.06□□□□□ -0.32
RAB3D-201ENST00000222120 RDH12Q96NR8 316 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 ALPK1Q96QP1 1244 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 MACROD1Q9BQ69 325 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 CCDC3Q9BQI4 270 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 DOHHQ9BU89 302 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 RDH14Q9HBH5 336 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 PHPT1Q9NRX4 125 aaPredicted RBP13.06□□□□□ -0.32
RAB3D-201ENST00000222120 TET1Q8NFU7 2136 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 ERI3O43414 337 aaKnown RBP13.06□□□□□ -0.32
RAB3D-201ENST00000222120 NUAK1O60285 661 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 TIMP2P16035 220 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 PDZK1Q5T2W1 519 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 DUS1LQ6P1R4 473 aaKnown RBP13.06□□□□□ -0.32
RAB3D-201ENST00000222120 GPR149Q86SP6 731 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 UBASH3BQ8TF42 649 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 CXorf40BQ96DE9 158 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 FAM129BQ96TA1 746 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 ATP6V1HQ9UI12 483 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 BTBD3Q9Y2F9 522 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 CENPFP49454 3210 aa13.06□□□□□ -0.32
RAB3D-201ENST00000222120 SNTNA6NMZ2 147 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 TAF4O00268 1085 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 SCAMP2O15127 329 aaKnown RBP13.05□□□□□ -0.32
RAB3D-201ENST00000222120 CD160O95971 181 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 PIM1P11309 404 aaPredicted RBP13.05□□□□□ -0.32
RAB3D-201ENST00000222120 C6P13671 934 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 PTX3P26022 381 aaPredicted RBP13.05□□□□□ -0.32
RAB3D-201ENST00000222120 TIE1P35590 1138 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 FEN1P39748 380 aaKnown RBP13.05□□□□□ -0.32
RAB3D-201ENST00000222120 ALDH3B2P48448 385 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 NCBP2P52298 156 aaKnown RBP eCLIP13.05□□□□□ -0.32
RAB3D-201ENST00000222120 ERVFC1P60507 584 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 ST3GAL4Q11206 333 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 PPIGQ13427 754 aaKnown RBP eCLIP13.05□□□□□ -0.32
RAB3D-201ENST00000222120 OR5AR1Q8NGP9 310 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 WDR48Q8TAF3 677 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 GIN1Q9NXP7 522 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 TAS2R9Q9NYW1 312 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 TEKT2Q9UIF3 430 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 ATG2BQ96BY7 2078 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 SLC22A1O15245 554 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 AP2A2O94973 939 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 HPRP00739 348 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 CKMT1AP12532 417 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 ZNF8P17098 575 aaPredicted RBP13.05□□□□□ -0.32
RAB3D-201ENST00000222120 OPRL1P41146 370 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 LASP1Q14847 261 aaKnown RBP13.05□□□□□ -0.32
RAB3D-201ENST00000222120 CLCA4Q14CN2 919 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 BORAQ6PGQ7 559 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 OXR1Q8N573 874 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 ABHD11Q8NFV4 315 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 BPIFB1Q8TDL5 484 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 LGALS12Q96DT0 336 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 CPPED1Q9BRF8 314 aaPredicted RBP13.05□□□□□ -0.32
RAB3D-201ENST00000222120 SNTG1Q9NSN8 517 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 PPT2Q9UMR5 302 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 WDR37Q9Y2I8 494 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 PDE9AO76083 593 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 CH25HO95992 272 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 HOXB6P17509 224 aaKnown RBP13.05□□□□□ -0.32
RAB3D-201ENST00000222120 GSTM2P28161 218 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 C21orf33P30042 268 aaPredicted RBP13.05□□□□□ -0.32
RAB3D-201ENST00000222120 PNLIPRP1P54315 467 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 PRMT2P55345 433 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 LIPIQ6XZB0 460 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 CPA6Q8N4T0 437 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 C10orf53Q8N6V4 93 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 ZNF480Q8WV37 535 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 RPL3LQ92901 407 aaKnown RBP13.05□□□□□ -0.32
RAB3D-201ENST00000222120 ZNF347Q96SE7 839 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 ACTL8Q9H568 366 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 MS4A12Q9NXJ0 267 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 GPR83Q9NYM4 423 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 OR1A2Q9Y585 309 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 CARNS1A5YM72 827 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 FAM25AB3EWG3 89 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 FAM25CB3EWG5 89 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 FAM25GB3EWG6 89 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 TMCC2O75069 709 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 CCNYL3P0C7X3 344 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 CD247P20963 164 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 CD9P21926 228 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 PAICSP22234 425 aaKnown RBP13.05□□□□□ -0.32
RAB3D-201ENST00000222120 FSHRP23945 695 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 TGM3Q08188 693 aa13.05□□□□□ -0.32
RAB3D-201ENST00000222120 RGNQ15493 299 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms