RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 GAL3ST1Q99999 423 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 CHCHD6Q9BRQ6 235 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 REG4Q9BYZ8 158 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 GSX2Q9BZM3 304 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 FBRSL1Q9HCM7 1045 aaKnown RBP13.13□□□□□ -0.31
GABPB1-201ENST00000220429 HMX1Q9NP08 348 aaPredicted RBP13.13□□□□□ -0.31
GABPB1-201ENST00000220429 ADAM30Q9UKF2 790 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 ORC6Q9Y5N6 252 aa13.13□□□□□ -0.31
GABPB1-201ENST00000220429 NEMP2A6NFY4 417 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 LDB2O43679 373 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 PRAMEF11O60813 436 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 MT-CO1P00395 513 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 CD72P21854 359 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 CLCN5P51795 746 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 HK3P52790 923 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 GRB7Q14451 532 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 PDZK1Q5T2W1 519 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 ERICH5Q6P6B1 374 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 LDB1Q86U70 411 aaPredicted RBP13.12□□□□□ -0.31
GABPB1-201ENST00000220429 ZZZ3Q8IYH5 903 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 CRIPAKQ8N1N5 446 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 CFAP52Q8N1V2 620 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 NANPQ8TBE9 248 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 DNAJB9Q9UBS3 223 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 PFDN2Q9UHV9 154 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 LRFN2Q9ULH4 789 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 SLC22A7Q9Y694 548 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 LAMA2P24043 3122 aaKnown RBP13.12□□□□□ -0.31
GABPB1-201ENST00000220429 PMS2P1A4D2B8 440 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 OR51F1A6NGY5 319 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 SLC38A8A6NNN8 435 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 ADAM12O43184 909 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 SLC7A4O43246 635 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 SLC6A4P31645 630 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 CLCN7P51798 805 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 YBEYP58557 167 aaPredicted RBP13.12□□□□□ -0.31
GABPB1-201ENST00000220429 PUDPQ08623 228 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 PTPRRQ15256 657 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 GPR33Q49SQ1 333 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 TECRLQ5HYJ1 363 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 SAXO2Q658L1 398 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 CCDC149Q6ZUS6 474 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 AHSA2Q719I0 299 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 CCDC126Q96EE4 140 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 CAPNS2Q96L46 248 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 RBP7Q96R05 134 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 MFSD1Q9H3U5 465 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 POMKQ9H5K3 350 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 MARCH4Q9P2E8 410 aaPredicted RBP13.12□□□□□ -0.31
GABPB1-201ENST00000220429 MGAT4BQ9UQ53 548 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 ANKRD36A6QL64 1941 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 MFSD2BA6NFX1 497 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 GNGT2O14610 69 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 SGCEO43556 437 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 SIGLEC6O43699 453 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 EIF1BO60739 113 aaKnown RBP13.12□□□□□ -0.31
GABPB1-201ENST00000220429 ATP6AP2O75787 350 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 RHOBTB1O94844 696 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 TGM6O95932 706 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 CST1P01037 141 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 PRKACGP22612 351 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 EIF1P41567 113 aaKnown RBP13.12□□□□□ -0.31
GABPB1-201ENST00000220429 CAMK1Q14012 370 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 SLC14A2Q15849 920 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 HES5Q5TA89 166 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 HECTD2Q5U5R9 776 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 ZNF425Q6IV72 752 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 USP45Q70EL2 814 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 PIWIL4Q7Z3Z4 852 aaKnown RBP13.12□□□□□ -0.31
GABPB1-201ENST00000220429 NPAS4Q8IUM7 802 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 FAM126BQ8IXS8 530 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 IPCEF1Q8WWN9 437 aaPredicted RBP13.12□□□□□ -0.31
GABPB1-201ENST00000220429 QRFPRQ96P65 431 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 POLR1EQ9GZS1 481 aaKnown RBP13.12□□□□□ -0.31
GABPB1-201ENST00000220429 PDFQ9HBH1 243 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 PRDM9Q9NQV7 894 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 CREBZFQ9NS37 354 aa13.12□□□□□ -0.31
GABPB1-201ENST00000220429 LYARQ9NX58 379 aaKnown RBP13.12□□□□□ -0.31
GABPB1-201ENST00000220429 A0A0D9SEW6 157 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.11□□□□□ -0.31
GABPB1-201ENST00000220429 C9JVG2 144 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 H7C4K7 107 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 DNASE2O00115 360 aaPredicted RBP13.11□□□□□ -0.31
GABPB1-201ENST00000220429 S1PR4O95977 384 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 ALDOCP09972 364 aaKnown RBP13.11□□□□□ -0.31
GABPB1-201ENST00000220429 ITGAMP11215 1152 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 ATP5F1P24539 256 aaPredicted RBP13.11□□□□□ -0.31
GABPB1-201ENST00000220429 HTR1EP28566 365 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 ARFIP1P53367 373 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 LIMK1P53667 647 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 EEFSECP57772 596 aaKnown RBP13.11□□□□□ -0.31
GABPB1-201ENST00000220429 ELAVL2Q12926 359 aaKnown RBP13.11□□□□□ -0.31
GABPB1-201ENST00000220429 GBX1Q14549 363 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 SMAD2Q15796 467 aaKnown RBP13.11□□□□□ -0.31
GABPB1-201ENST00000220429 RFX4Q33E94 735 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 C4orf46Q504U0 113 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 ZC3H12BQ5HYM0 836 aaKnown RBP13.11□□□□□ -0.31
GABPB1-201ENST00000220429 LARP4Q71RC2 724 aaKnown RBP eCLIP13.11□□□□□ -0.31
GABPB1-201ENST00000220429 CHMP1BQ7LBR1 199 aa13.11□□□□□ -0.31
GABPB1-201ENST00000220429 CEP76Q8TAP6 659 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms