RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 KCNK2O95069 426 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 POP4O95707 220 aaKnown RBP16.58■□□□□ 0.25
USB1-201ENST00000219281 GSTT2P0CG29 244 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 GSTT2BP0CG30 244 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 HSD3B1P14060 373 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 POU2F1P14859 743 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 HSD3B2P26439 372 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 HLA-FP30511 346 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 PREPP48147 710 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 MVDP53602 400 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 RPS13P62277 151 aaKnown RBP16.58■□□□□ 0.25
USB1-201ENST00000219281 HSD11B1LQ7Z5J1 315 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 CAMKMTQ7Z624 323 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 RASGRP3Q8IV61 690 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 CPXM2Q8N436 756 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 LILRA3Q8N6C8 439 aaPredicted RBP16.58■□□□□ 0.25
USB1-201ENST00000219281 SCAIQ8N9R8 606 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 OR7G3Q8NG95 312 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 OR9Q2Q8NGE9 314 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 TCF25Q9BQ70 676 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 CHCHD6Q9BRQ6 235 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 CENPOQ9BU64 300 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 CPEB1Q9BZB8 566 aaKnown RBP16.58■□□□□ 0.25
USB1-201ENST00000219281 NXF2Q9GZY0 626 aaKnown RBP16.58■□□□□ 0.25
USB1-201ENST00000219281 QPCTLQ9NXS2 382 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 SLC6A14Q9UN76 642 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 EXO1Q9UQ84 846 aaKnown RBP16.58■□□□□ 0.25
USB1-201ENST00000219281 RBMX2Q9Y388 322 aaKnown RBP16.58■□□□□ 0.25
USB1-201ENST00000219281 TSC22D4Q9Y3Q8 395 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 UGT2A1Q9Y4X1 527 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 LTBP2Q14767 1821 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 PSIP1O75475 530 aaKnown RBP16.58■□□□□ 0.24
USB1-201ENST00000219281 TIMP1P01033 207 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 GBAP04062 536 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 GABRB1P18505 474 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 S100A5P33763 92 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 HBA1P69905 142 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 KBTBD8Q8NFY9 601 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 NFKBIDQ8NI38 313 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 Q96MT0 163 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 SAMD11Q96NU1 681 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 CCM2Q9BSQ5 444 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 FAM83DQ9H4H8 585 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 MS4A12Q9NXJ0 267 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 TAS2R16Q9NYV7 291 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 POU2F3Q9UKI9 436 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 ITGB1BP2Q9UKP3 347 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 DUSP12Q9UNI6 340 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 HS3ST2Q9Y278 367 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 PCDHGA3Q9Y5H0 932 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 AP1M2Q9Y6Q5 423 aa16.58■□□□□ 0.24
USB1-201ENST00000219281 RNASET2O00584 256 aaKnown RBP16.57■□□□□ 0.24
USB1-201ENST00000219281 SNPHO15079 494 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 C6orf47O95873 294 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 LINC00271P0C7V0 271 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 ALOX12P18054 663 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 TIA1P31483 386 aaKnown RBP eCLIP16.57■□□□□ 0.241e-11■■■■■ 33
USB1-201ENST00000219281 RGS6P49758 472 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 SCARB2Q14108 478 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 SYTL3Q4VX76 610 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 C10orf62Q5T681 223 aaPredicted RBP16.57■□□□□ 0.24
USB1-201ENST00000219281 PNCKQ6P2M8 343 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 Q6ZVL8 140 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 Q6ZVU0 165 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 DEPDC4Q8N2C3 294 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 ATL1Q8WXF7 558 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 PAWRQ96IZ0 340 aaKnown RBP16.57■□□□□ 0.24
USB1-201ENST00000219281 METTL2AQ96IZ6 378 aaKnown RBP16.57■□□□□ 0.24
USB1-201ENST00000219281 LMLNQ96KR4 655 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 RAD9AQ99638 391 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 SLC35A5Q9BS91 424 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 SMG9Q9H0W8 520 aaKnown RBP16.57■□□□□ 0.24
USB1-201ENST00000219281 IMPAD1Q9NX62 359 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 ACSL6Q9UKU0 697 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 CAB39Q9Y376 341 aaPredicted RBP16.57■□□□□ 0.24
USB1-201ENST00000219281 A8MU76 341 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 PCDH17O14917 1159 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 TSPAN6O43657 245 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 TNFRSF21O75509 655 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 FGF18O76093 207 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 SLC16A8O95907 504 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 DNTTP04053 509 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 GJA1P17302 382 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 FBXO43Q4G163 708 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 SPIN4Q56A73 249 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 GCNT6Q5T4J0 391 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 ATAD3BQ5T9A4 648 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 OTOP2Q7RTS6 562 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 TMC8Q8IU68 726 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 DENND6BQ8NEG7 585 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 YME1L1Q96TA2 773 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 PKP4Q99569 1192 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 CCDC59Q9P031 241 aaKnown RBP16.57■□□□□ 0.24
USB1-201ENST00000219281 A3GALT2U3KPV4 340 aa16.57■□□□□ 0.24
USB1-201ENST00000219281 ZNF8P17098 575 aaPredicted RBP16.56■□□□□ 0.24
USB1-201ENST00000219281 IMPA1P29218 277 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 ETV3P41162 512 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 PRIM2P49643 509 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 ZNF45Q02386 682 aa16.56■□□□□ 0.24
USB1-201ENST00000219281 GDPD4Q6W3E5 623 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms