RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 C1orf189Q5VU69 101 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 ABHD17CQ6PCB6 329 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 SLC38A9Q8NBW4 561 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 RGMAQ96B86 450 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 CCT7Q99832 543 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 TXLNGQ9NUQ3 528 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 FOXJ2Q9P0K8 574 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 ADAM21Q9UKJ8 722 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 SLC22A7Q9Y694 548 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 A0A0A6YYC8 382 aaPredicted RBP25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 TRPC5OSA6NMA1 111 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 I3L1I5 382 aaPredicted RBP25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 ZNF195O14628 629 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 RSL1D1O76021 490 aaKnown RBP25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 EMP3P54852 163 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 BTN3A2P78410 334 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 TGM3Q08188 693 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 HERC3Q15034 1050 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 GALNTL6Q49A17 601 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 OR9A4Q8NGU2 314 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 TUBGCP3Q96CW5 907 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 APIPQ96GX9 242 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 KCNC2Q96PR1 638 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 TEFMQ96QE5 360 aaKnown RBP25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 ZPBPQ9BS86 351 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 MEAF6Q9HAF1 191 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 ANKHQ9HCJ1 492 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 RIC8BQ9NVN3 520 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 NAALAD2Q9Y3Q0 740 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 GOLGA8QA0A0J9YX86 632 aa25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 GOLGA8OA6NCC3 632 aa25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 ZNF860A6NHJ4 632 aa25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 GOLGA8NF8WBI6 632 aa25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 DIAPH2O60879 1101 aa25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 CPNE3O75131 537 aaKnown RBP25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 SEMA3DO95025 777 aa25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 SSR2P43308 183 aa25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 AQP5P55064 265 aa25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 TBL3Q12788 808 aaKnown RBP25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 CAMK2BQ13554 666 aa25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 YOD1Q5VVQ6 348 aaPredicted RBP25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 CGB2Q6NT52 195 aa25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 PDSS2Q86YH6 399 aa25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 C1orf52Q8N6N3 182 aaKnown RBP25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 SRFBP1Q8NEF9 429 aaKnown RBP25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 SCNM1Q9BWG6 230 aa25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 FAM107BQ9H098 131 aa25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 WDR55Q9H6Y2 383 aaPredicted RBP25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 COPS7BQ9H9Q2 264 aaPredicted RBP25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 LRTM1Q9HBL6 345 aa25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 LHX9Q9NQ69 397 aa25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 DCTN4Q9UJW0 460 aa25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 PCDHGA3Q9Y5H0 932 aa25.87■■□□□ 1.73
CHMP4B-201ENST00000217402 A0A1B0GX78 115 aa25.86■■□□□ 1.73
CHMP4B-201ENST00000217402 SDHDO14521 159 aa25.86■■□□□ 1.73
CHMP4B-201ENST00000217402 DSCR3O14972 297 aa25.86■■□□□ 1.73
CHMP4B-201ENST00000217402 LSM1O15116 133 aaKnown RBP25.86■■□□□ 1.73
CHMP4B-201ENST00000217402 FOXS1O43638 330 aa25.86■■□□□ 1.73
CHMP4B-201ENST00000217402 PEX11AO75192 247 aa25.86■■□□□ 1.73
CHMP4B-201ENST00000217402 KLHL18O94889 574 aa25.86■■□□□ 1.73
CHMP4B-201ENST00000217402 SMIM10L1P0DMW3 83 aa25.86■■□□□ 1.73
CHMP4B-201ENST00000217402 EPHA3P29320 983 aa25.86■■□□□ 1.73
CHMP4B-201ENST00000217402 FAM53BQ14153 422 aa25.86■■□□□ 1.73
CHMP4B-201ENST00000217402 SLC9B1Q4ZJI4 515 aa25.86■■□□□ 1.73
CHMP4B-201ENST00000217402 RHBDD2Q6NTF9 364 aa25.86■■□□□ 1.73
CHMP4B-201ENST00000217402 COMMD6Q7Z4G1 85 aa25.86■■□□□ 1.73
CHMP4B-201ENST00000217402 RFWD2Q8NHY2 731 aa25.86■■□□□ 1.73
CHMP4B-201ENST00000217402 SMIM10Q96HG1 83 aa25.86■■□□□ 1.73
CHMP4B-201ENST00000217402 TRIM55Q9BYV6 548 aa25.86■■□□□ 1.73
CHMP4B-201ENST00000217402 SGK494L7N484 410 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 SEC22BO75396 215 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 TGDSO95455 350 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 GBAP04062 536 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 TROVE2P10155 538 aaKnown RBP eCLIP25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 CERS1P27544 350 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 RBMS1P29558 406 aaKnown RBP25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 ACSM2AQ08AH3 577 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 AP5B1Q2VPB7 878 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 ATP6AP1LQ52LC2 224 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 ACSM2BQ68CK6 577 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 OR4C11Q6IEV9 310 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 ZNF793Q6ZN11 406 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 METTL4Q8N3J2 472 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 SLC46A1Q96NT5 459 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 TBCDQ9BTW9 1192 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 ZNF717Q9BY31 904 aaPredicted RBP25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 PRDM7Q9NQW5 492 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 C1orf109Q9NX04 203 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 AHSPQ9NZD4 102 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 MAU2Q9Y6X3 613 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 GMNCA6NCL1 334 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 GALR3O60755 368 aaPredicted RBP25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 STK17BO94768 372 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 HBQ1P09105 142 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 ALOX15P16050 662 aaPredicted RBP25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 BSGP35613 385 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 RPL38P63173 70 aaKnown RBP25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 MTERF4Q7Z6M4 381 aaKnown RBP25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 AMER3Q8N944 861 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 MMABQ96EY8 250 aaPredicted RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms