RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 COX20Q5RI15 118 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 TPRG1LQ5T0D9 272 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 STEAP3Q658P3 488 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 ADNP2Q6IQ32 1131 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 TRIM40Q6P9F5 258 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 ANGPTL8Q6UXH0 198 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 SLCO4C1Q6ZQN7 724 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 Q6ZVL8 140 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 ZNF367Q7RTV3 350 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 ZNF513Q8N8E2 541 aaPredicted RBP12.77□□□□□ -0.36
SRP54-201ENST00000216774 SCAIQ8N9R8 606 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 OR2A12Q8NGT7 310 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 TXNDC15Q96J42 360 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 PKP4Q99569 1192 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 NIPSNAP1Q9BPW8 284 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 TCF25Q9BQ70 676 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 SLC35A5Q9BS91 424 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 GPBP1L1Q9HC44 474 aaPredicted RBP12.77□□□□□ -0.36
SRP54-201ENST00000216774 AMBNQ9NP70 447 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 SLCO3A1Q9UIG8 710 aa12.77□□□□□ -0.36
SRP54-201ENST00000216774 NUP214P35658 2090 aaPredicted RBP12.77□□□□□ -0.37
SRP54-201ENST00000216774 SLC5A10A0PJK1 596 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 SH3D21A4FU49 640 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 ARRDC5A6NEK1 342 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 FOXE1O00358 373 aaPredicted RBP12.77□□□□□ -0.37
SRP54-201ENST00000216774 ZNF197O14709 1029 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 NPC1O15118 1278 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 PLXNA2O75051 1894 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 OPN1SWP03999 348 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 STSP08842 583 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 DBTP11182 482 aaKnown RBP12.77□□□□□ -0.37
SRP54-201ENST00000216774 PRIM2P49643 509 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 HMGA2P52926 109 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 ST3GAL4Q11206 333 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 KRR1Q13601 381 aaKnown RBP12.77□□□□□ -0.37
SRP54-201ENST00000216774 ZNF630Q2M218 657 aaPredicted RBP12.77□□□□□ -0.37
SRP54-201ENST00000216774 CCSMST1Q4G0I0 132 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 ARMCX4Q5H9R4 360 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 TMC8Q8IU68 726 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 OR52J3Q8NH60 311 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 FOPNLQ96NB1 174 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 VPS35Q96QK1 796 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 PIP5K1AQ99755 562 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 MAPKAP1Q9BPZ7 522 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 RIOK2Q9BVS4 552 aaKnown RBP12.77□□□□□ -0.37
SRP54-201ENST00000216774 CDCA4Q9BXL8 241 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 SACM1LQ9NTJ5 587 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 PEX16Q9Y5Y5 336 aa12.77□□□□□ -0.37
SRP54-201ENST00000216774 EFCAB10A6NFE3 127 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 FADS2P1A8MWK0 482 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 TBX1O43435 398 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 TLL1O43897 1013 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 MPZL2O60487 215 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 ZNF8P17098 575 aaPredicted RBP12.76□□□□□ -0.37
SRP54-201ENST00000216774 TNFRSF1BP20333 461 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 ETV3P41162 512 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 RECQLP46063 649 aaPredicted RBP12.76□□□□□ -0.37
SRP54-201ENST00000216774 XCR1P46094 333 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 BDKRB1P46663 353 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 OR1E2P47887 323 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 LIMS1P48059 325 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 PREPP48147 710 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 PRLHRP49683 370 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 EEF1A2Q05639 463 aaKnown RBP12.76□□□□□ -0.37
SRP54-201ENST00000216774 SLC13A2Q13183 592 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 ZNF852Q6ZMS4 543 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 DDX53Q86TM3 631 aaKnown RBP12.76□□□□□ -0.37
SRP54-201ENST00000216774 RASGEF1AQ8N9B8 481 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 OR4K1Q8NGD4 311 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 UTP15Q8TED0 518 aaKnown RBP12.76□□□□□ -0.37
SRP54-201ENST00000216774 BTN2A2Q8WVV5 523 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 AUTS2Q8WXX7 1259 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 SLC35B4Q969S0 331 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 NEIL2Q969S2 332 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 WDR34Q96EX3 536 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 CCM2Q9BSQ5 444 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 PRM3Q9NNZ6 103 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 C1GALT1Q9NS00 363 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 CNOT2Q9NZN8 540 aaKnown RBP12.76□□□□□ -0.37
SRP54-201ENST00000216774 FAM8A1Q9UBU6 413 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 ABT1Q9ULW3 272 aaKnown RBP12.76□□□□□ -0.37
SRP54-201ENST00000216774 HCN4Q9Y3Q4 1203 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 SCN5AQ14524 2016 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 LOC100506127A0A0U1RQW1 187 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 PRAMEF25A6NGN4 478 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 TEX28O15482 410 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 GPR37L1O60883 481 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 SH3BGRLO75368 114 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 C6orf47O95873 294 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 PTHP01270 115 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 FURINP09958 794 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 GRK5P34947 590 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 ETV6P41212 452 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 NUDT6P53370 316 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 UGT2B15P54855 530 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 CDC42P60953 191 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 SELENBP1Q13228 472 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 ZNF284Q2VY69 593 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 TIMM50Q3ZCQ8 353 aa12.76□□□□□ -0.37
SRP54-201ENST00000216774 ASTLQ6HA08 431 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms