RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 NOXRED1Q6NXP6 359 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 NCEH1Q6PIU2 408 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 GRASPQ7Z6J2 395 aaPredicted RBP13.1□□□□□ -0.31
SF3A1-201ENST00000215793 CMTR2Q8IYT2 770 aaKnown RBP13.1□□□□□ -0.31
SF3A1-201ENST00000215793 OR6N1Q8NGY5 312 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 ZNF420Q8TAQ5 688 aaPredicted RBP13.1□□□□□ -0.31
SF3A1-201ENST00000215793 THEM6Q8WUY1 208 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 MCHR1Q99705 422 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 FAM83CQ9BQN1 747 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 IFT52Q9Y366 437 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 HTRA2O43464 458 aaPredicted RBP13.1□□□□□ -0.31
SF3A1-201ENST00000215793 PROM1O43490 865 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 HTR1AP08908 422 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 GSTT2P0CG29 244 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 PREPP48147 710 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 DHPSP49366 369 aaPredicted RBP13.1□□□□□ -0.31
SF3A1-201ENST00000215793 MAD2L1BPQ15013 274 aaPredicted RBP13.1□□□□□ -0.31
SF3A1-201ENST00000215793 ZNF829Q3KNS6 432 aaPredicted RBP13.1□□□□□ -0.31
SF3A1-201ENST00000215793 MLIPQ5VWP3 458 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 NANOGP8Q6NSW7 305 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 IGDCC3Q8IVU1 814 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 LNX2Q8N448 690 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 BBS10Q8TAM1 723 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 RELTQ969Z4 430 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 RAB7BQ96AH8 199 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 XYLT2Q9H1B5 865 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 NANOGQ9H9S0 305 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 OR6C70A6NIJ9 312 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 H0YAE9 185 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 CHRM1P11229 460 aaPredicted RBP13.1□□□□□ -0.31
SF3A1-201ENST00000215793 PVALBP20472 110 aaPredicted RBP13.1□□□□□ -0.31
SF3A1-201ENST00000215793 FADDQ13158 208 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 MAB21L1Q13394 359 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 ANKDD1AQ495B1 522 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 CYS1Q717R9 158 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 PLD6Q8N2A8 252 aaKnown RBP13.1□□□□□ -0.31
SF3A1-201ENST00000215793 TCEANCQ8N8B7 351 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 OR4K14Q8NGD5 310 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 THAP6Q8TBB0 222 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 HDAC2Q92769 488 aaKnown RBP13.1□□□□□ -0.31
SF3A1-201ENST00000215793 S100A16Q96FQ6 103 aaKnown RBP13.1□□□□□ -0.31
SF3A1-201ENST00000215793 AIFM2Q9BRQ8 373 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 PTGES2Q9H7Z7 377 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 GRHPRQ9UBQ7 328 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 TMEM98Q9Y2Y6 226 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 LSM1O15116 133 aaKnown RBP13.1□□□□□ -0.31
SF3A1-201ENST00000215793 SOX14O95416 240 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 GBAP04062 536 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 CSN2P05814 226 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 PRKACGP22612 351 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 DIO3P55073 304 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 IRF5Q13568 498 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 FAM214AQ32MH5 1076 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 C14orf80Q86SX3 495 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 OR5P2Q8WZ92 322 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 METTL8Q9H825 291 aaKnown RBP13.1□□□□□ -0.31
SF3A1-201ENST00000215793 TAS2R9Q9NYW1 312 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 PCDHB14Q9Y5E9 798 aa13.1□□□□□ -0.31
SF3A1-201ENST00000215793 MYO5BQ9ULV0 1848 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 A0A096LPI6 279 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 A0A0D9SEW6 157 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 E7EQ34 232 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 E7ESA3 106 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 PEX12O00623 359 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 XPNPEP2O43895 674 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 FUT4P22083 530 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 PRKCDQ05655 676 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 GRIK2Q13002 908 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 SUSD1Q6UWL2 747 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 FAM43BQ6ZT52 329 aaPredicted RBP13.09□□□□□ -0.31
SF3A1-201ENST00000215793 ZNF550Q7Z398 422 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 C12orf43Q96C57 262 aaKnown RBP13.09□□□□□ -0.31
SF3A1-201ENST00000215793 SLC2A13Q96QE2 648 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 ALG5Q9Y673 324 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 MED1Q15648 1581 aaPredicted RBP13.09□□□□□ -0.31
SF3A1-201ENST00000215793 C2orf92A0A1B0GVN3 265 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 LDB2O43679 373 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 DNAJB5O75953 348 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 SNAPC5O75971 98 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 C8orf89P0DMQ9 161 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 SCGB2B2Q4G0G5 96 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 ZNF805Q5CZA5 627 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 DGLUCYQ7Z3D6 616 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 LMO3Q8TAP4 145 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 GNPDA2Q8TDQ7 276 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 BLOC1S5-TXNDC5H3BN57 136 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 TPD52L2O43399 206 aaKnown RBP13.09□□□□□ -0.31
SF3A1-201ENST00000215793 GALTP07902 379 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 MPC1LP0DKB6 136 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 AP2S1P53680 142 aaPredicted RBP13.09□□□□□ -0.31
SF3A1-201ENST00000215793 RPS27LQ71UM5 84 aaKnown RBP13.09□□□□□ -0.31
SF3A1-201ENST00000215793 CTU1Q7Z7A3 348 aaKnown RBP13.09□□□□□ -0.31
SF3A1-201ENST00000215793 OR4K1Q8NGD4 311 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 SHKBP1Q8TBC3 707 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 IGSF21Q96ID5 467 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 C17orf62Q9BQA9 187 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 TAS2R10Q9NYW0 307 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 PRODH2Q9UF12 536 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 DLGAP1O14490 977 aa13.09□□□□□ -0.31
SF3A1-201ENST00000215793 NUAK1O60285 661 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms