RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Galk1Q9R0N0 392 aa17.71■□□□□ 0.43
Ccdc3-201ENSMUST00000027988 Atp6ap1Q9R1Q9 463 aa17.71■□□□□ 0.43
Ccdc3-201ENSMUST00000027988 HpnO35453 436 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Rgs7O54829 469 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Gm5460Q3UQ97 254 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Gm10696Q3UTC4 357 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Stox2Q499E5 926 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Ablim3Q69ZX8 682 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Olfr1322Q7TQW3 310 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Eme1Q8BJW7 570 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Fam131aQ8BWU3 361 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Mtrf1Q8K126 446 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Fam129bQ8R1F1 749 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Chchd4Q8VEA4 139 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Chst15Q91XQ5 561 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Mthfd1Q922D8 935 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Ppil1Q9D0W5 166 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Uqcrc2Q9DB77 453 aaKnown RBP17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Acsl4Q9QUJ7 711 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Gm14147A2AQX6 640 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 1700014D04RikJ3QMS2 983 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 AcadvlP50544 656 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Gpr165Q3V3A3 455 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Wbp4Q61048 376 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Il18r1Q61098 537 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 OclnQ61146 521 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 SelenomQ8VHC3 145 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Mapk8Q91Y86 384 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Qrsl1Q9CZN8 525 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Tmem53Q9D0Z3 276 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Dll4Q9JI71 686 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Fbxo8Q9QZN3 319 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 KcpQ3U492 1550 aa17.7■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Fam136b-psA0A140T8T1 138 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Rps13P62301 151 aaKnown RBP17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Dcdc2Q5DU00 475 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 GalpQ810H5 117 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Zc3hav1lQ8BFR1 296 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 AmotQ8VHG2 1126 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Dnase1l2Q9D1G0 278 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 9230112D13RikQ9D260 137 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Amdhd1Q9DBA8 426 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Wwp2Q9DBH0 870 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Cdc20Q9JJ66 499 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Chd3B1AR17 2055 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Gm37596A0A0A6YXL2 336 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 A0A286YDU1 74 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 AccsA2AIG8 502 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Nt5c1aA3KFX0 365 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Gm8922F6XVS9 199 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Vmn2r12L7N217 831 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Gm8897L7N294 181 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Cdc6O89033 562 aaKnown RBP17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Dnajb5O89114 348 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Atxn1P54254 791 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Rin3P59729 980 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 D13Ertd608eQ3UPR8 151 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Q3UST5 385 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Tmem72Q8C3K5 275 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Prmt5Q8CIG8 637 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Q8K039 155 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Cnot3Q8K0V4 751 aaKnown RBP17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 HopxQ8R1H0 73 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Basp1Q91XV3 226 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Pcdhgb2Q91XX7 928 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Slc25a37Q920G8 338 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Ccdc77Q9CZH8 489 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Wdr53Q9DB94 358 aa17.69■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Gm42688A0A0R3P9D1 673 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Cops4O88544 406 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Rrm2P11157 390 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Stard6P59096 233 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Sox4Q06831 440 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 MocosQ14CH1 862 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 GcgrQ61606 485 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Hsd3b5Q61694 373 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Olfr1308Q7TQX0 320 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 ZfatQ7TS63 1237 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Trim50Q810I2 483 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Rhox11Q810N8 206 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Bag5Q8CI32 447 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Asb17Q8VHP9 295 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Hhipl2Q9D2G9 717 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 NtsQ9D3P9 169 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Ttc9bQ9D6E4 239 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 1700034I23RikQ9D9Q3 184 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Upk3aQ9JKX8 287 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 TrioQ0KL02 3102 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Col4a6B1AVK5 1691 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Olfr1375A0A0N4SUP0 313 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Ccdc163A2AGD7 326 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Tnfrsf25B1AWN9 411 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Gm8879F6R3J9 157 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Fbxw9F8VPX2 458 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Serpinb9cI7HJI5 387 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 HgdO09173 445 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Pdlim1O70400 327 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Gstm1P10649 218 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Fkbp14P59024 211 aa17.68■□□□□ 0.42
Ccdc3-201ENSMUST00000027988 Dab1P97318 588 aa17.68■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms