RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 TM9SF2Q99805 663 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 RTP3Q9BQQ7 232 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 ATG10Q9H0Y0 220 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 ZNF222Q9UK12 451 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 ACSL6Q9UKU0 697 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 CCL27Q9Y4X3 112 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 TRAV6A0A075B6T7 132 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 GTPBP1O00178 669 aaKnown RBP13.25□□□□□ -0.29
SCARB2-227ENST00000640957 CBX4O00257 560 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 STX16O14662 325 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 FGF10O15520 208 aaPredicted RBP13.25□□□□□ -0.29
SCARB2-227ENST00000640957 PCDH7O60245 1069 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 CNR2P34972 360 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 GZMMP51124 257 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 PLEKHM3Q6ZWE6 761 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 TMEM86AQ8N2M4 240 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 DNAJC5GQ8N7S2 189 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 FBXO32Q969P5 355 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 GDF15Q99988 308 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 TCF25Q9BQ70 676 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 POLR2J2Q9GZM3 115 aaKnown RBP13.25□□□□□ -0.29
SCARB2-227ENST00000640957 ABCC13Q9NSE7 274 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 OLA1Q9NTK5 396 aaKnown RBP13.25□□□□□ -0.29
SCARB2-227ENST00000640957 CLEC4AQ9UMR7 237 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 SCML1Q9UN30 329 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 RAI2Q9Y5P3 530 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 TRPV2Q9Y5S1 764 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 UNC80Q8N2C7 3258 aa13.25□□□□□ -0.29
SCARB2-227ENST00000640957 NYNRINQ9P2P1 1898 aaKnown RBP13.24□□□□□ -0.29
SCARB2-227ENST00000640957 LOC285095A0A1B0GVY8 99 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 ADAMDEC1O15204 470 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 SDC2P34741 201 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 FGFBP1Q14512 234 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 WSCD2Q2TBF2 565 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 ATXN7L2Q5T6C5 722 aaPredicted RBP13.24□□□□□ -0.29
SCARB2-227ENST00000640957 LAMTOR1Q6IAA8 161 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 SBSNQ6UWP8 590 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 VN1R5Q7Z5H4 357 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 GPR156Q8NFN8 814 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 SIGLEC11Q96RL6 698 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 FAM129BQ96TA1 746 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 ZYG11BQ9C0D3 744 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 NMRK2Q9NPI5 230 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 CTPS2Q9NRF8 586 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 HCSTQ9UBK5 93 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 RWDD3Q9Y3V2 267 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 PRSS21Q9Y6M0 314 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 ENTPD6O75354 484 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 GKP32189 559 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 GGT2P36268 569 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 CCT3P49368 545 aaKnown RBP13.24□□□□□ -0.29
SCARB2-227ENST00000640957 GPR19Q15760 415 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 STK11Q15831 433 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.24□□□□□ -0.29
SCARB2-227ENST00000640957 ATCAYQ86WG3 371 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 VWA5B2Q8N398 1253 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 IQCF1Q8N6M8 205 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 C1GALT1C1Q96EU7 318 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 RIPOR3Q96MK2 946 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 HHATLQ9HCP6 504 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 WASHC1A8K0Z3 465 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 FAM220BPB1ANY3 271 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 H3BN98 237 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 MANBAO00462 879 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 SLC25A14O95258 325 aaPredicted RBP13.24□□□□□ -0.29
SCARB2-227ENST00000640957 INPP1P49441 399 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 SUOXP51687 545 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 PTPN5P54829 565 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 PTGES3Q15185 160 aaKnown RBP13.24□□□□□ -0.29
SCARB2-227ENST00000640957 TOR1AIP1Q5JTV8 583 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 MTFR2Q6P444 385 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 ZNF852Q6ZMS4 543 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 C16orf59Q7L2K0 433 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 ZNF280BQ86YH2 543 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 NAGSQ8N159 534 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 SIPA1Q96FS4 1042 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 PKP4Q99569 1192 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 DPCDQ9BVM2 203 aaPredicted RBP13.24□□□□□ -0.29
SCARB2-227ENST00000640957 NXF2Q9GZY0 626 aaKnown RBP13.24□□□□□ -0.29
SCARB2-227ENST00000640957 ELOVL6Q9H5J4 265 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 GLTPQ9NZD2 209 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 CCDC59Q9P031 241 aaKnown RBP13.24□□□□□ -0.29
SCARB2-227ENST00000640957 SH3BP4Q9P0V3 963 aa13.24□□□□□ -0.29
SCARB2-227ENST00000640957 ISM1B1AKI9 464 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 FABP7O15540 132 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 SUV39H1O43463 412 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 HRGP04196 525 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 LAMP1P11279 417 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 COX7A2P14406 83 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 PRKACAP17612 351 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 SDC1P18827 310 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 PTNP21246 168 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 GZMKP49863 264 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 CRYBA2P53672 197 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 SRP54P61011 504 aaKnown RBP13.23□□□□□ -0.29
SCARB2-227ENST00000640957 ABHD18Q0P651 414 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 MRPL28Q13084 256 aaKnown RBP13.23□□□□□ -0.29
SCARB2-227ENST00000640957 SNAPC1Q16533 368 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 C5orf22Q49AR2 442 aa13.23□□□□□ -0.29
SCARB2-227ENST00000640957 ATG9BQ674R7 924 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms