RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 CPA2P48052 419 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 AGFG1P52594 562 aaKnown RBP10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 WNT3P56703 355 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 VEZF1Q14119 521 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 SF3B4Q15427 424 aaKnown RBP eCLIP10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 CCSMST1Q4G0I0 132 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 POMZP3Q6PJE2 187 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 IL20RBQ6UXL0 311 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 FAM47EQ6ZV65 393 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 PLD3Q8IV08 490 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 SMPDL3AQ92484 453 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 P3H4Q92791 437 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 TBC1D20Q96BZ9 403 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 PTCHD1Q96NR3 888 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 FERMT1Q9BQL6 677 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 CCDC77Q9BR77 488 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 GBA3Q9H227 469 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 CXorf56Q9H5V9 222 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 CHMP5Q9NZZ3 219 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 C6orf203Q9P0P8 240 aaPredicted RBP10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 SAMD15Q9P1V8 674 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 SPRR3Q9UBC9 169 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 LIMA1Q9UHB6 759 aaKnown RBP10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 TAC3Q9UHF0 121 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 FEZ2Q9UHY8 353 aaPredicted RBP10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 VPS9D1Q9Y2B5 631 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 NFS1Q9Y697 457 aa10.19□□□□□ -0.78
PTP4A1-207ENST00000639568 A8MUA0 341 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 HAT1O14929 419 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 B4GALT2O60909 372 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 ERN1O75460 977 aaKnown RBP10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 KRT1P04264 644 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 CTSSP25774 331 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 ZNF136P52737 540 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 ATP5J2P56134 94 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 SNRPNP63162 240 aaKnown RBP10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 PRDX1Q06830 199 aaKnown RBP10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 MSLNQ13421 630 aaPredicted RBP10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 TFDP2Q14188 446 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 NFKBIBQ15653 356 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 HYAL4Q2M3T9 481 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 ACSF3Q4G176 576 aaPredicted RBP10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 ICE2Q659A1 982 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 ZNF425Q6IV72 752 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 PLEKHM3Q6ZWE6 761 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 ABHD13Q7L211 337 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 LIX1Q8N485 282 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 ZCCHC10Q8TBK6 192 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 STYXQ8WUJ0 223 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 TMEM171Q8WVE6 324 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 PIK3IP1Q96FE7 263 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 TBL1YQ9BQ87 522 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 CARD6Q9BX69 1037 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 BEX2Q9BXY8 128 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 REG4Q9BYZ8 158 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 LANCL2Q9NS86 450 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 ABCF3Q9NUQ8 709 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 TRMT1Q9NXH9 659 aaKnown RBP10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 NAALAD2Q9Y3Q0 740 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 PKD1L1Q8TDX9 2849 aa10.18□□□□□ -0.78
PTP4A1-207ENST00000639568 ZNF407Q9C0G0 2248 aa10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 C2orf72A6NCS6 295 aa10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 IQCF5A8MTL0 148 aa10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 KIF5CO60282 957 aa10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 OR2J2O76002 312 aa10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 P04436 131 aa10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 AOAHP28039 575 aa10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 PPARGP37231 505 aaPredicted RBP10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 ADARP55265 1226 aaKnown RBP10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 HYAL2Q12891 473 aa10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 CLEC12BQ2HXU8 276 aa10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 E4F1Q66K89 784 aaPredicted RBP10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 TMEM214Q6NUQ4 689 aaKnown RBP10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 SLC26A11Q86WA9 606 aa10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 NFAM1Q8NET5 270 aaPredicted RBP10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 B3GNT7Q8NFL0 401 aa10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 ROBO4Q8WZ75 1007 aa10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 ZBED6CLQ96FA7 236 aaPredicted RBP10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 MRFAP1L1Q96HT8 127 aa10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 MACROD1Q9BQ69 325 aa10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 SACM1LQ9NTJ5 587 aa10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 GALNT8Q9NY28 637 aa10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 ZNF226Q9NYT6 803 aa10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 RUVBL2Q9Y230 463 aaKnown RBP10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 MPDZO75970 2070 aa10.17□□□□□ -0.78
PTP4A1-207ENST00000639568 OR51F1A6NGY5 319 aa10.16□□□□□ -0.78
PTP4A1-207ENST00000639568 ZNF860A6NHJ4 632 aa10.16□□□□□ -0.78
PTP4A1-207ENST00000639568 ZNF839A8K0R7 811 aa10.16□□□□□ -0.78
PTP4A1-207ENST00000639568 KPNA5O15131 536 aa10.16□□□□□ -0.78
PTP4A1-207ENST00000639568 CST8O60676 142 aa10.16□□□□□ -0.78
PTP4A1-207ENST00000639568 ZFAND5O76080 213 aa10.16□□□□□ -0.78
PTP4A1-207ENST00000639568 OR6B1O95007 311 aa10.16□□□□□ -0.78
PTP4A1-207ENST00000639568 PECAM1P16284 738 aaPredicted RBP10.16□□□□□ -0.78
PTP4A1-207ENST00000639568 ENDOUP21128 410 aaKnown RBP10.16□□□□□ -0.78
PTP4A1-207ENST00000639568 RPS15AP62244 130 aaKnown RBP10.16□□□□□ -0.78
PTP4A1-207ENST00000639568 ABATP80404 500 aa10.16□□□□□ -0.78
PTP4A1-207ENST00000639568 CAPRIN1Q14444 709 aaKnown RBP10.16□□□□□ -0.78
PTP4A1-207ENST00000639568 SPARCL1Q14515 664 aa10.16□□□□□ -0.78
PTP4A1-207ENST00000639568 POU6F1Q14863 301 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms