RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 CCSAPQ6IQ19 270 aaPredicted RBP10.5□□□□□ -0.73
SNIP1-204ENST00000638725 ZNF367Q7RTV3 350 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 NRARPQ7Z6K4 114 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 GATAD2AQ86YP4 633 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 BBS7Q8IWZ6 715 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 OR8H2Q8N162 312 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 OR4A15Q8NGL6 344 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 PIK3R3Q92569 461 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 CRELD1Q96HD1 420 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 CASD1Q96PB1 797 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 SLC22A12Q96S37 553 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 SPATA9Q9BWV2 254 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 NDEL1Q9GZM8 345 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 GPATCH2Q9NW75 528 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 SPATA6Q9NWH7 488 aaPredicted RBP10.5□□□□□ -0.73
SNIP1-204ENST00000638725 SH3BP4Q9P0V3 963 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 PLXNB3Q9ULL4 1909 aa10.5□□□□□ -0.73
SNIP1-204ENST00000638725 A8MV72 311 aaPredicted RBP10.49□□□□□ -0.73
SNIP1-204ENST00000638725 PLK4O00444 970 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 ARHGAP33O14559 1287 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 PCDH17O14917 1159 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 GPX5O75715 221 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 MFN2O95140 757 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 ANXA4P09525 319 aaPredicted RBP10.49□□□□□ -0.73
SNIP1-204ENST00000638725 PCSK2P16519 638 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 DOC2AQ14183 400 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 EIF4HQ15056 248 aaKnown RBP10.49□□□□□ -0.73
SNIP1-204ENST00000638725 SSX1Q16384 188 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 ZNF385BQ569K4 471 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 ZNF648Q5T619 568 aaPredicted RBP10.49□□□□□ -0.73
SNIP1-204ENST00000638725 RETSATQ6NUM9 610 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 ATCAYQ86WG3 371 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 HJURPQ8NCD3 748 aaPredicted RBP10.49□□□□□ -0.73
SNIP1-204ENST00000638725 GPR156Q8NFN8 814 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 OVCA2Q8WZ82 227 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 TCF25Q9BQ70 676 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 SLC30A2Q9BRI3 323 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 DDX28Q9NUL7 540 aaKnown RBP10.49□□□□□ -0.73
SNIP1-204ENST00000638725 CD84Q9UIB8 345 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 BTNL2Q9UIR0 455 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 TMPRSS11EQ9UL52 423 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 OGDHLQ9ULD0 1010 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 CFL2Q9Y281 166 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 WBP11Q9Y2W2 641 aaKnown RBP10.49□□□□□ -0.73
SNIP1-204ENST00000638725 ANKRD34BA5PLL1 514 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 GFYI3L273 518 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 IDSP22304 550 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 LHCGRP22888 699 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 TNFSF8P32971 234 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 MVDP53602 400 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 GANABQ14697 944 aaKnown RBP10.49□□□□□ -0.73
SNIP1-204ENST00000638725 PTGES3Q15185 160 aaKnown RBP10.49□□□□□ -0.73
SNIP1-204ENST00000638725 TEAD4Q15561 434 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 DGKKQ5KSL6 1271 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 SLX4IPQ5VYV7 408 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 ZNF544Q6NX49 715 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 VASH1Q7L8A9 365 aaPredicted RBP10.49□□□□□ -0.73
SNIP1-204ENST00000638725 UBQLNLQ8IYU4 475 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 OR4K1Q8NGD4 311 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 WDR36Q8NI36 951 aaKnown RBP10.49□□□□□ -0.73
SNIP1-204ENST00000638725 C11orf24Q96F05 449 aaPredicted RBP10.49□□□□□ -0.73
SNIP1-204ENST00000638725 OR2A14Q96R47 310 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 FAM129BQ96TA1 746 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 C2orf49Q9BVC5 232 aaPredicted RBP10.49□□□□□ -0.73
SNIP1-204ENST00000638725 EXOSC4Q9NPD3 245 aaKnown RBP10.49□□□□□ -0.73
SNIP1-204ENST00000638725 KLHL42Q9P2K6 505 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 ACSL6Q9UKU0 697 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 CLEC4EQ9ULY5 219 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 CORO2BQ9UQ03 480 aa10.49□□□□□ -0.73
SNIP1-204ENST00000638725 H3BM21 787 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 EIF3FO00303 357 aaPredicted RBP10.48□□□□□ -0.73
SNIP1-204ENST00000638725 CCRL2O00421 344 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 RGS5O15539 181 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 SOCS5O75159 536 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 ZNF821O75541 412 aaPredicted RBP10.48□□□□□ -0.73
SNIP1-204ENST00000638725 KRT75O95678 551 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 GALTP07902 379 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 MPC1LP0DKB6 136 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 PPIBP23284 216 aaKnown RBP10.48□□□□□ -0.73
SNIP1-204ENST00000638725 TUFMP49411 452 aaKnown RBP10.48□□□□□ -0.73
SNIP1-204ENST00000638725 C21orf58P58505 322 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 TEKQ02763 1124 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 PTSQ03393 145 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 TAF12Q16514 161 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 ZMAT1Q5H9K5 638 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 LIPJQ5W064 366 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 C19orf48Q6RUI8 117 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 TMC5Q6UXY8 1006 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 VPS37AQ8NEZ2 397 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 LILRB4Q8NHJ6 448 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 NFKBIDQ8NI38 313 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 UPF1Q92900 1129 aaKnown RBP eCLIP10.48□□□□□ -0.73
SNIP1-204ENST00000638725 FOXJ1Q92949 421 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 C19orf43Q9BQ61 176 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 CCDC32Q9BV29 185 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 OR2B2Q9GZK3 357 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 ZNF556Q9HAH1 456 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 SMURF1Q9HCE7 757 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 MGAT4DA6NG13 374 aa10.48□□□□□ -0.73
SNIP1-204ENST00000638725 IGSF6O95976 241 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms