RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 CMC1Q7Z7K0 106 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 CTAGE6Q86UF2 777 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 KLHDC8AQ8IYD2 350 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 CLEC18CQ8NCF0 446 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 UTP15Q8TED0 518 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 PSMF1Q92530 271 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 EXT2Q93063 718 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 IMMP1LQ96LU5 166 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 OR1F2PQ96R84 312 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 COL12A1Q99715 3063 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 TMEM79Q9BSE2 394 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 CNOT10Q9H9A5 744 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 CD274Q9NZQ7 290 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 RNF112Q9ULX5 631 aa15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 USP9XQ93008 2570 aaPredicted RBP15.81■□□□□ 0.12
CACNA1A-259ENST00000638114 ESPL1Q14674 2120 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 DYTNA2CJ06 578 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 URADA6NGE7 173 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 TAPBPO15533 448 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 CHST10O43529 356 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 S100BP04271 92 aaPredicted RBP15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 ITGAMP11215 1152 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 IL10P22301 178 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 SOX11P35716 441 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 GMPRP36959 345 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 HSPA7P48741 367 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 AGTR2P50052 363 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 RAB8AP61006 207 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 ARG2P78540 354 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 SLBPQ14493 270 aaKnown RBP eCLIP15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 TLR1Q15399 786 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 TOR1AIP1Q5JTV8 583 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 SULT1C3Q6IMI6 304 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 SLCO4C1Q6ZQN7 724 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 ANKRD37Q7Z713 158 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 AMER2Q8N7J2 671 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 SNX31Q8N9S9 440 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 KIAA1191Q96A73 305 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 MRRFQ96E11 262 aaKnown RBP15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 UBXN10Q96LJ8 280 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 SLC6A16Q9GZN6 736 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 ZDHHC18Q9NUE0 388 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 DNAJC11Q9NVH1 559 aa15.8■□□□□ 0.12
CACNA1A-259ENST00000638114 CLGNO14967 610 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 DNAJB6O75190 326 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 STK16O75716 305 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 FHP07954 510 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 SERPINA6P08185 405 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 TSFMP43897 325 aaKnown RBP15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 RHAGQ02094 409 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 HYAL2Q12891 473 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 ABRAXAS2Q15018 415 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 NR6A1Q15406 480 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 NSDHLQ15738 373 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 BTBD16Q32M84 506 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 CDKL4Q5MAI5 379 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 FHL5Q5TD97 284 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 B3GNTL1Q67FW5 361 aaPredicted RBP15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 TMIGD1Q6UXZ0 262 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 TBC1D1Q86TI0 1168 aaPredicted RBP15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 KRT78Q8N1N4 520 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 CATSPER1Q8NEC5 780 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 CREB3L4Q8TEY5 395 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 CCT6BQ92526 530 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 TSLPQ969D9 159 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 ESAMQ96AP7 390 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 TBC1D20Q96BZ9 403 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 MAGEB10Q96LZ2 347 aaPredicted RBP15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 CAPS2Q9BXY5 557 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 KLHL31Q9H511 634 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 ALG9Q9H6U8 611 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 LANCL2Q9NS86 450 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 PLA2G3Q9NZ20 509 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 GPRC5BQ9NZH0 403 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 NTNG1Q9Y2I2 539 aa15.79■□□□□ 0.12
CACNA1A-259ENST00000638114 SCN2AQ99250 2005 aa15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 MAGEB17A8MXT2 336 aa15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 AGFG2O95081 481 aa15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 SLC35E2BP0CK96 405 aa15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 TFEBP19484 476 aa15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 JAK1P23458 1154 aa15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 CRABP2P29373 138 aa15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 GGT5P36269 586 aa15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 STXBP1P61764 594 aaKnown RBP15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 ACTN3Q08043 901 aaPredicted RBP15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 EIF2S3LQ2VIR3 472 aaKnown RBP15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 SFT2D3Q587I9 215 aa15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 PDPRQ8NCN5 879 aa15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 TTLQ8NG68 377 aa15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 OR1N1Q8NGS0 311 aa15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 STAG3L4Q8TBR4 150 aa15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 NMRAL1Q9HBL8 299 aa15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 AGPAT4Q9NRZ5 378 aa15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 MTRF1LQ9UGC7 380 aaKnown RBP15.78■□□□□ 0.12
CACNA1A-259ENST00000638114 SUPT3HB4E1H0 165 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 C4orf51C9J302 202 aa15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 PSMD12O00232 456 aaPredicted RBP15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 CCNT2O60583 730 aaKnown RBP15.77■□□□□ 0.12
CACNA1A-259ENST00000638114 B4GALT2O60909 372 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms