RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 TNFSF10P50591 281 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 ATP6V0D1P61421 351 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 STXBP1P61764 594 aaKnown RBP17.87■□□□□ 0.45
CLN6-221ENST00000637494 CKAP4Q07065 602 aaKnown RBP17.87■□□□□ 0.45
CLN6-221ENST00000637494 TGFBIQ15582 683 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 KRT78Q8N1N4 520 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 M1APQ8TC57 530 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 RHBDF1Q96CC6 855 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 MOCOSQ96EN8 888 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 FAR2Q96K12 515 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 C5orf34Q96MH7 638 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 SPNS1Q9H2V7 528 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 CAB39LQ9H9S4 337 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 SMYD2Q9NRG4 433 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 OLAHQ9NV23 265 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 WWOXQ9NZC7 414 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 GRHL1Q9NZI5 618 aa17.87■□□□□ 0.45
CLN6-221ENST00000637494 TCRBV9S1A1TA0A576 114 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 OR5H15A6NDH6 313 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 CLGNO14967 610 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 CHST10O43529 356 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 PIAS1O75925 651 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 WDPCPO95876 746 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 SERPINA6P08185 405 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 C1GALT1C1LP0DN25 315 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 GSTM2P28161 218 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 STX2P32856 288 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 HNF4AP41235 474 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 OR4D2P58180 307 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 TAS2R50P59544 299 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 RHAGQ02094 409 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 SFT2D3Q587I9 215 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 GRTP1Q5TC63 336 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 PAPD4Q6PIY7 484 aaKnown RBP17.86■□□□□ 0.45
CLN6-221ENST00000637494 GPSM1Q86YR5 675 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 ANKRD53Q8N9V6 530 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 ARMC2Q8NEN0 867 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 OR5T3Q8NGG3 340 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 UTP15Q8TED0 518 aaKnown RBP17.86■□□□□ 0.45
CLN6-221ENST00000637494 CCT6BQ92526 530 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 GPR22Q99680 433 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 MCMBPQ9BTE3 642 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 PRM3Q9NNZ6 103 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 GPRC5BQ9NZH0 403 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 HECTD1Q9ULT8 2610 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 FLNCQ14315 2725 aa17.86■□□□□ 0.45
CLN6-221ENST00000637494 A0A088AWK7 358 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 FAM159BA6NKW6 160 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 CXorf49A8MYA2 514 aaPredicted RBP17.85■□□□□ 0.45
CLN6-221ENST00000637494 PHGDHO43175 533 aaKnown RBP17.85■□□□□ 0.45
CLN6-221ENST00000637494 B4GALT2O60909 372 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 F10P00742 488 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 RNH1P13489 461 aaKnown RBP17.85■□□□□ 0.45
CLN6-221ENST00000637494 ZNF10P21506 573 aaPredicted RBP17.85■□□□□ 0.45
CLN6-221ENST00000637494 EFNA3P52797 238 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 RAB8AP61006 207 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 OLR1P78380 273 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 TOR1AIP1Q5JTV8 583 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 CDKL4Q5MAI5 379 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 SULT1C3Q6IMI6 304 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 TMIGD1Q6UXZ0 262 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 RAPH1Q70E73 1250 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 KLHDC8AQ8IYD2 350 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 SEC16BQ96JE7 1060 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 PTCHD1Q96NR3 888 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 UNKQ9C0B0 810 aaKnown RBP17.85■□□□□ 0.45
CLN6-221ENST00000637494 SLC6A16Q9GZN6 736 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 PITHD1Q9GZP4 211 aaPredicted RBP17.85■□□□□ 0.45
CLN6-221ENST00000637494 LANCL2Q9NS86 450 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 DNAJC11Q9NVH1 559 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 CD274Q9NZQ7 290 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 PLEKHB1Q9UF11 243 aaPredicted RBP17.85■□□□□ 0.45
CLN6-221ENST00000637494 RNF112Q9ULX5 631 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 DOPEY2Q9Y3R5 2298 aa17.85■□□□□ 0.45
CLN6-221ENST00000637494 ESPL1Q14674 2120 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 OR2W5A6NFC9 320 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 ANKDD1BA6NHY2 528 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 PRMT3O60678 531 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 RASAL1O95294 804 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 CRYABP02511 175 aaKnown RBP17.84■□□□□ 0.45
CLN6-221ENST00000637494 GDF5P43026 501 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 MAGEA4P43358 317 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 SLC6A12P48065 614 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 PER3P56645 1201 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 RAB10P61026 200 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 NAB1Q13506 487 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 SLBPQ14493 270 aaKnown RBP eCLIP17.84■□□□□ 0.45
CLN6-221ENST00000637494 SLMAPQ14BN4 828 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 MEP1AQ16819 746 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 ACER2Q5QJU3 275 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 CYP4X1Q8N118 509 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 SPATA6LQ8N4H0 392 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 SLC5A8Q8N695 610 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 PPM1NQ8N819 430 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 FBXO25Q8TCJ0 367 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 RHBGQ9H310 441 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 MMP25Q9NPA2 562 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 SCN3AQ9NY46 2000 aa17.84■□□□□ 0.45
CLN6-221ENST00000637494 PRAMEF2O60811 474 aa17.83■□□□□ 0.44
CLN6-221ENST00000637494 CD1DP15813 335 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms