RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 HES7Q9BYE0 225 aa17.35■□□□□ 0.37
CLN6-220ENST00000637450 UNKQ9C0B0 810 aaKnown RBP17.35■□□□□ 0.37
CLN6-220ENST00000637450 SPNS1Q9H2V7 528 aa17.35■□□□□ 0.37
CLN6-220ENST00000637450 KLHL1Q9NR64 748 aa17.35■□□□□ 0.37
CLN6-220ENST00000637450 IKZF3Q9UKT9 509 aa17.35■□□□□ 0.37
CLN6-220ENST00000637450 ASPDHA6ND91 283 aa17.34■□□□□ 0.37
CLN6-220ENST00000637450 GABRR3A8MPY1 467 aa17.34■□□□□ 0.37
CLN6-220ENST00000637450 CDK2AP1O14519 115 aa17.34■□□□□ 0.37
CLN6-220ENST00000637450 GUCA1CO95843 209 aa17.34■□□□□ 0.37
CLN6-220ENST00000637450 B3GALT4O96024 378 aa17.34■□□□□ 0.37
CLN6-220ENST00000637450 SERPIND1P05546 499 aa17.34■□□□□ 0.37
CLN6-220ENST00000637450 JAK1P23458 1154 aa17.34■□□□□ 0.37
CLN6-220ENST00000637450 GRNP28799 593 aaKnown RBP17.34■□□□□ 0.37
CLN6-220ENST00000637450 AHRP35869 848 aa17.34■□□□□ 0.37
CLN6-220ENST00000637450 OLR1P78380 273 aa17.34■□□□□ 0.37
CLN6-220ENST00000637450 RGS1Q08116 209 aa17.34■□□□□ 0.37
CLN6-220ENST00000637450 KRTCAP3Q53RY4 240 aa17.34■□□□□ 0.37
CLN6-220ENST00000637450 HP1BP3Q5SSJ5 553 aaPredicted RBP17.34■□□□□ 0.37
CLN6-220ENST00000637450 TRMT10BQ6PF06 316 aaKnown RBP17.34■□□□□ 0.37
CLN6-220ENST00000637450 SBSNQ6UWP8 590 aa17.34■□□□□ 0.37
CLN6-220ENST00000637450 ABHD13Q7L211 337 aa17.34■□□□□ 0.37
CLN6-220ENST00000637450 LGI4Q8N135 537 aa17.34■□□□□ 0.37
CLN6-220ENST00000637450 PDIK1LQ8N165 341 aa17.34■□□□□ 0.37
CLN6-220ENST00000637450 UTP15Q8TED0 518 aaKnown RBP17.34■□□□□ 0.37
CLN6-220ENST00000637450 THAP3Q8WTV1 239 aaPredicted RBP17.34■□□□□ 0.37
CLN6-220ENST00000637450 PWWP2AQ96N64 755 aa17.34■□□□□ 0.37
CLN6-220ENST00000637450 CDCP1Q9H5V8 836 aa17.34■□□□□ 0.37
CLN6-220ENST00000637450 CLK4Q9HAZ1 481 aaKnown RBP17.34■□□□□ 0.37
CLN6-220ENST00000637450 SLC19A2O60779 497 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 B4GALT2O60909 372 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 NEURL1O76050 574 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 ZNF888P0CJ79 500 aaPredicted RBP17.33■□□□□ 0.36
CLN6-220ENST00000637450 CD46P15529 392 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 EEF1DP29692 281 aaKnown RBP17.33■□□□□ 0.36
CLN6-220ENST00000637450 TAS2R50P59544 299 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 FRG1Q14331 258 aaKnown RBP17.33■□□□□ 0.36
CLN6-220ENST00000637450 MORF4L2Q15014 288 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 PPP1R3AQ16821 1122 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 STEAP4Q687X5 459 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 RPTNQ6XPR3 784 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 RPS19BP1Q86WX3 136 aaKnown RBP17.33■□□□□ 0.36
CLN6-220ENST00000637450 HORMAD2Q8N7B1 307 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 TMEM178AQ8NBL3 297 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 CFAP36Q96G28 342 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 GPR137Q96N19 417 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 PTCHD1Q96NR3 888 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 WDR83Q9BRX9 315 aaKnown RBP17.33■□□□□ 0.36
CLN6-220ENST00000637450 PELI2Q9HAT8 420 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 SH3BGRL2Q9UJC5 107 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 CHMP2BQ9UQN3 213 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 ZNF835Q9Y2P0 537 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 TEX264Q9Y6I9 313 aa17.33■□□□□ 0.36
CLN6-220ENST00000637450 CTAGE15A4D2H0 777 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 NDC80O14777 642 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 ZSCAN12O43309 604 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 PRMT3O60678 531 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 MLYCDO95822 493 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 SP1P08047 785 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 SMIM10L1P0DMW3 83 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 CASP6P55212 293 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 BTG2P78543 158 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 REEP5Q00765 189 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 ALDH6A1Q02252 535 aaKnown RBP17.32■□□□□ 0.36
CLN6-220ENST00000637450 OC90Q02509 493 aaPredicted RBP17.32■□□□□ 0.36
CLN6-220ENST00000637450 HYAL2Q12891 473 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 C3AR1Q16581 482 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 SLC25A25Q6KCM7 469 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 NXPE4Q6UWF7 544 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 BNC2Q6ZN30 1099 aaPredicted RBP17.32■□□□□ 0.36
CLN6-220ENST00000637450 QSOX2Q6ZRP7 698 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 CTAGE6Q86UF2 777 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 THOC6Q86W42 341 aaKnown RBP17.32■□□□□ 0.36
CLN6-220ENST00000637450 MCEMP1Q8IX19 187 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 ANKRD53Q8N9V6 530 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 TRPV3Q8NET8 790 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 ANKRD7Q92527 254 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 LRRC39Q96DD0 335 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 SMIM10Q96HG1 83 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 TSNARE1Q96NA8 513 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 SLC6A16Q9GZN6 736 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 RUBCNLQ9H714 662 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 DYRK1BQ9Y463 629 aa17.32■□□□□ 0.36
CLN6-220ENST00000637450 URADA6NGE7 173 aa17.31■□□□□ 0.36
CLN6-220ENST00000637450 NPIPA5E9PKD4 350 aa17.31■□□□□ 0.36
CLN6-220ENST00000637450 FAM227AF5H4B4 570 aa17.31■□□□□ 0.36
CLN6-220ENST00000637450 TCP1P17987 556 aaKnown RBP17.31■□□□□ 0.36
CLN6-220ENST00000637450 HTR1EP28566 365 aa17.31■□□□□ 0.36
CLN6-220ENST00000637450 RAB8AP61006 207 aa17.31■□□□□ 0.36
CLN6-220ENST00000637450 NAA30Q147X3 362 aaPredicted RBP17.31■□□□□ 0.36
CLN6-220ENST00000637450 ZNF630Q2M218 657 aaPredicted RBP17.31■□□□□ 0.36
CLN6-220ENST00000637450 ZNF468Q5VIY5 522 aaPredicted RBP17.31■□□□□ 0.36
CLN6-220ENST00000637450 XKRXQ6PP77 449 aa17.31■□□□□ 0.36
CLN6-220ENST00000637450 Q6ZPB1 254 aaPredicted RBP17.31■□□□□ 0.36
CLN6-220ENST00000637450 SYDE1Q6ZW31 735 aaPredicted RBP17.31■□□□□ 0.36
CLN6-220ENST00000637450 GALNTL5Q7Z4T8 443 aa17.31■□□□□ 0.36
CLN6-220ENST00000637450 SPPL2CQ8IUH8 684 aa17.31■□□□□ 0.36
CLN6-220ENST00000637450 SIAH3Q8IW03 269 aa17.31■□□□□ 0.36
CLN6-220ENST00000637450 KIF2BQ8N4N8 673 aa17.31■□□□□ 0.36
CLN6-220ENST00000637450 NKAPQ8N5F7 415 aaKnown RBP17.31■□□□□ 0.36
CLN6-220ENST00000637450 FRMD6Q96NE9 622 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms