RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 RPS6KA1Q15418 735 aa18.83■□□□□ 0.6
TARDBP-228ENST00000629725 EMC4Q5J8M3 183 aa18.83■□□□□ 0.6
TARDBP-228ENST00000629725 PRELID2Q8N945 189 aa18.83■□□□□ 0.6
TARDBP-228ENST00000629725 ZFP62Q8NB50 900 aaPredicted RBP18.83■□□□□ 0.6
TARDBP-228ENST00000629725 OR52N2Q8NGI0 321 aa18.83■□□□□ 0.6
TARDBP-228ENST00000629725 EIF2B3Q9NR50 452 aaKnown RBP18.83■□□□□ 0.6
TARDBP-228ENST00000629725 REXO2Q9Y3B8 237 aaKnown RBP18.83■□□□□ 0.6
TARDBP-228ENST00000629725 HRNRQ86YZ3 2850 aaPredicted RBP18.83■□□□□ 0.6
TARDBP-228ENST00000629725 FAM237BA0A1B0GVD1 139 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 SAGE2PA6NJ88 616 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 LCMT2O60294 686 aaKnown RBP18.82■□□□□ 0.6
TARDBP-228ENST00000629725 ZSCAN5DPP0CG00 497 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 MPC1LP0DKB6 136 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 MGAT1P26572 445 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 GRK3P35626 688 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 NUP107P57740 925 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 GPR85P60893 370 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 SNX1Q13596 522 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 CEBPEQ15744 281 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 CILP2Q8IUL8 1156 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 ARMC10Q8N2F6 343 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 OR5M3Q8NGP4 307 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 GIMAP7Q8NHV1 300 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 C1orf54Q8WWF1 131 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 PTCHD1Q96NR3 888 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 DEFB126Q9BYW3 111 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 PCBD2Q9H0N5 130 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 GSX1Q9H4S2 264 aaPredicted RBP18.82■□□□□ 0.6
TARDBP-228ENST00000629725 SYBUQ9NX95 663 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 VPS9D1Q9Y2B5 631 aa18.82■□□□□ 0.6
TARDBP-228ENST00000629725 A0A1B0GTL3 188 aa18.81■□□□□ 0.6
TARDBP-228ENST00000629725 B4GALT2O60909 372 aa18.81■□□□□ 0.6
TARDBP-228ENST00000629725 ENO3P13929 434 aaPredicted RBP18.81■□□□□ 0.6
TARDBP-228ENST00000629725 RPL22P35268 128 aaKnown RBP18.81■□□□□ 0.6
TARDBP-228ENST00000629725 BASP1P80723 227 aaKnown RBP18.81■□□□□ 0.6
TARDBP-228ENST00000629725 MEF2AQ02078 507 aaPredicted RBP18.81■□□□□ 0.6
TARDBP-228ENST00000629725 FOXD4Q12950 439 aaPredicted RBP18.81■□□□□ 0.6
TARDBP-228ENST00000629725 PAOXQ6QHF9 649 aa18.81■□□□□ 0.6
TARDBP-228ENST00000629725 CYHR1Q6ZMK1 362 aa18.81■□□□□ 0.6
TARDBP-228ENST00000629725 UBE2R2Q712K3 238 aaPredicted RBP18.81■□□□□ 0.6
TARDBP-228ENST00000629725 CENPUQ71F23 418 aa18.81■□□□□ 0.6
TARDBP-228ENST00000629725 C17orf64Q86WR6 236 aa18.81■□□□□ 0.6
TARDBP-228ENST00000629725 CYP4Z2PQ8N1L4 340 aa18.81■□□□□ 0.6
TARDBP-228ENST00000629725 TMEM156Q8N614 296 aa18.81■□□□□ 0.6
TARDBP-228ENST00000629725 ZNF740Q8NDX6 193 aa18.81■□□□□ 0.6
TARDBP-228ENST00000629725 MYRIPQ8NFW9 859 aa18.81■□□□□ 0.6
TARDBP-228ENST00000629725 INTS10Q9NVR2 710 aaKnown RBP18.81■□□□□ 0.6
TARDBP-228ENST00000629725 KLHL42Q9P2K6 505 aa18.81■□□□□ 0.6
TARDBP-228ENST00000629725 ST6GALNAC2Q9UJ37 374 aa18.81■□□□□ 0.6
TARDBP-228ENST00000629725 SH2B3Q9UQQ2 575 aa18.81■□□□□ 0.6
TARDBP-228ENST00000629725 TMEM200CA6NKL6 621 aa18.8■□□□□ 0.6
TARDBP-228ENST00000629725 CHST10O43529 356 aa18.8■□□□□ 0.6
TARDBP-228ENST00000629725 GALR3O60755 368 aaPredicted RBP18.8■□□□□ 0.6
TARDBP-228ENST00000629725 CTAG2O75638 210 aa18.8■□□□□ 0.6
TARDBP-228ENST00000629725 SKP1P63208 163 aa18.8■□□□□ 0.6
TARDBP-228ENST00000629725 OLR1P78380 273 aa18.8■□□□□ 0.6
TARDBP-228ENST00000629725 QSOX2Q6ZRP7 698 aa18.8■□□□□ 0.6
TARDBP-228ENST00000629725 MDGA2Q7Z553 956 aa18.8■□□□□ 0.6
TARDBP-228ENST00000629725 AFAP1L2Q8N4X5 818 aa18.8■□□□□ 0.6
TARDBP-228ENST00000629725 OR10Q1Q8NGQ4 319 aa18.8■□□□□ 0.6
TARDBP-228ENST00000629725 HES6Q96HZ4 224 aa18.8■□□□□ 0.6
TARDBP-228ENST00000629725 POLDIP3Q9BY77 421 aaKnown RBP18.8■□□□□ 0.6
TARDBP-228ENST00000629725 SLC6A16Q9GZN6 736 aa18.8■□□□□ 0.6
TARDBP-228ENST00000629725 DEFB127Q9H1M4 99 aa18.8■□□□□ 0.6
TARDBP-228ENST00000629725 LIME1Q9H400 295 aa18.8■□□□□ 0.6
TARDBP-228ENST00000629725 SOX13Q9UN79 622 aa18.8■□□□□ 0.6
TARDBP-228ENST00000629725 L3MBTL1Q9Y468 752 aa18.8■□□□□ 0.6
TARDBP-228ENST00000629725 NPIPA2E9PIF3 369 aa18.79■□□□□ 0.6
TARDBP-228ENST00000629725 NPIPA3F8WFD2 350 aa18.79■□□□□ 0.6
TARDBP-228ENST00000629725 NDUFS4O43181 175 aa18.79■□□□□ 0.6
TARDBP-228ENST00000629725 DNAJB6O75190 326 aa18.79■□□□□ 0.6
TARDBP-228ENST00000629725 NR0B1P51843 470 aaKnown RBP18.79■□□□□ 0.6
TARDBP-228ENST00000629725 BTG2P78543 158 aa18.79■□□□□ 0.6
TARDBP-228ENST00000629725 GXYLT1Q4G148 440 aa18.79■□□□□ 0.6
TARDBP-228ENST00000629725 DEFB134Q4QY38 66 aa18.79■□□□□ 0.6
TARDBP-228ENST00000629725 SEL1L2Q5TEA6 688 aa18.79■□□□□ 0.6
TARDBP-228ENST00000629725 KIAA0930Q6ICG6 404 aaPredicted RBP18.79■□□□□ 0.6
TARDBP-228ENST00000629725 SPNS2Q8IVW8 549 aa18.79■□□□□ 0.6
TARDBP-228ENST00000629725 MFSD9Q8NBP5 474 aa18.79■□□□□ 0.6
TARDBP-228ENST00000629725 ACRBPQ8NEB7 543 aa18.79■□□□□ 0.6
TARDBP-228ENST00000629725 NFAM1Q8NET5 270 aaPredicted RBP18.79■□□□□ 0.6
TARDBP-228ENST00000629725 KCNJ9Q92806 393 aa18.79■□□□□ 0.6
TARDBP-228ENST00000629725 CCDC68Q9H2F9 335 aa18.79■□□□□ 0.6
TARDBP-228ENST00000629725 DLL4Q9NR61 685 aa18.79■□□□□ 0.6
TARDBP-228ENST00000629725 ZNF358Q9NW07 568 aa18.79■□□□□ 0.6
TARDBP-228ENST00000629725 MED16Q9Y2X0 877 aa18.79■□□□□ 0.6
TARDBP-228ENST00000629725 FBN3Q75N90 2809 aa18.79■□□□□ 0.6
TARDBP-228ENST00000629725 ITGA10O75578 1167 aa18.78■□□□□ 0.6
TARDBP-228ENST00000629725 CDH1P12830 882 aa18.78■□□□□ 0.6
TARDBP-228ENST00000629725 FOSL1P15407 271 aa18.78■□□□□ 0.6
TARDBP-228ENST00000629725 ALOX12P18054 663 aa18.78■□□□□ 0.6
TARDBP-228ENST00000629725 PAMP19021 973 aa18.78■□□□□ 0.6
TARDBP-228ENST00000629725 MAOAP21397 527 aa18.78■□□□□ 0.6
TARDBP-228ENST00000629725 CLCN2P51788 898 aa18.78■□□□□ 0.6
TARDBP-228ENST00000629725 NIPAL1Q6NVV3 410 aa18.78■□□□□ 0.6
TARDBP-228ENST00000629725 NEPROQ6NW34 567 aa18.78■□□□□ 0.6
TARDBP-228ENST00000629725 KIAA1328Q86T90 577 aa18.78■□□□□ 0.6
TARDBP-228ENST00000629725 TIMMDC1Q9NPL8 285 aa18.78■□□□□ 0.6
TARDBP-228ENST00000629725 PNPLA3Q9NST1 481 aa18.78■□□□□ 0.6
TARDBP-228ENST00000629725 EDARQ9UNE0 448 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms