RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 DFNA5O60443 496 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 MSX2P35548 267 aaPredicted RBP12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 CDH11P55287 796 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 CREB5Q02930 508 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 PRKCZQ05513 592 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 LGI4Q8N135 537 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 HMCESQ96FZ2 354 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 KLHL13Q9P2N7 655 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 SCN1AP35498 2009 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 ANKRD33BA6NCL7 494 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 GPR68Q15743 365 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 CNPY1Q3B7I2 92 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 PLEKHG7Q6ZR37 379 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 CHPT1Q8WUD6 406 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 TMEM234Q8WY98 164 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 INPP4AQ96PE3 977 aaPredicted RBP12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 FNIP2Q9P278 1114 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 AQP12BA6NM10 295 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 GRID2O43424 1007 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 CAPSQ13938 189 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 AQP12AQ8IXF9 295 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 RASGEF1CQ8N431 466 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 MEPEQ9NQ76 525 aaPredicted RBP12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 PI4KAP42356 2102 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 CYB5BO43169 146 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 MYCLP1P12525 358 aaPredicted RBP12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 TIGD5Q53EQ6 642 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 AQP11Q8NBQ7 271 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 POTEKPQ9BYX7 375 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 TFB2MQ9H5Q4 396 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 CENPMQ9NSP4 180 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 ASB3Q9Y575 518 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 MYO16Q9Y6X6 1858 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 DIRAS3O95661 229 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 OC90Q02509 493 aaPredicted RBP12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 ARHGAP40Q5TG30 622 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 CNKSR3Q6P9H4 555 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 CCDC28AQ8IWP9 274 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 AHCTF1Q8WYP5 2266 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 OR6C70A6NIJ9 312 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 CILPO75339 1184 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 CTHP32929 405 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 AADACL2Q6P093 401 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 C12orf42Q96LP6 360 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 ZNF649Q9BS31 505 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 HEATR5BQ9P2D3 2071 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 LPLP06858 475 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 PRKCHP24723 683 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 MAGEA11P43364 429 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 IDH3AP50213 366 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 DNASE1L3Q13609 305 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 SDHAF4Q5VUM1 108 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 KIAA0930Q6ICG6 404 aaPredicted RBP12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 PHC2Q8IXK0 858 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 COQ8AQ8NI60 647 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 GPR152Q8TDT2 470 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 BACE2Q9Y5Z0 518 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 SLIT2O94813 1529 aa12.79□□□□□ -0.36
SYNGAP1-208ENST00000629380 HNRNPH3P31942 346 aaKnown RBP12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 TAS2R40P59535 323 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 PTPN20Q4JDL3 420 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 NOXRED1Q6NXP6 359 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 PLD5Q8N7P1 536 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 GAL3ST1Q99999 423 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 SOX30O94993 753 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 HMBOX1Q6NT76 420 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 S100A7AQ86SG5 101 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 SLC9B2Q86UD5 537 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 NKD2Q969F2 451 aaPredicted RBP12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 ZNF599Q96NL3 588 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 OR14A2Q96R54 314 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 SH2B3Q9UQQ2 575 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 FSCN2O14926 492 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 PITRM1Q5JRX3 1037 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 PPP1R14DQ9NXH3 145 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 AURKAO14965 403 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 PSPHP78330 225 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 MZT1Q08AG7 82 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 GLT8D1Q68CQ7 371 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 STON2Q8WXE9 905 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 ARNTL2Q8WYA1 636 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 GJE1A6NN92 205 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 AMY2BP19961 511 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 YAP1P46937 504 aaKnown RBP12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 MELKQ14680 651 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 RNF220Q5VTB9 566 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 XYLT1Q86Y38 959 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 ACDQ96AP0 544 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 ACBD6Q9BR61 282 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 CNTN3Q9P232 1028 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 SCN9AQ15858 1988 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 F5P12259 2224 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 LRRC10BA6NIK2 292 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 SLC34A2O95436 690 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 SLC3A1Q07837 685 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 SYNPOQ8N3V7 929 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 ASB15Q8WXK1 588 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 PTPN18Q99952 460 aa12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 PAK1IP1Q9NWT1 392 aaPredicted RBP12.78□□□□□ -0.36
SYNGAP1-208ENST00000629380 KCNIP1Q9NZI2 227 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms