RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 NPHS2Q9NP85 383 aa12.06□□□□□ -0.48
PNKP-217ENST00000625216 PNPOQ9NVS9 261 aa12.06□□□□□ -0.48
PNKP-217ENST00000625216 ARL15Q9NXU5 204 aa12.06□□□□□ -0.48
PNKP-217ENST00000625216 WWOXQ9NZC7 414 aa12.06□□□□□ -0.48
PNKP-217ENST00000625216 ANKMY1Q9P2S6 941 aa12.06□□□□□ -0.48
PNKP-217ENST00000625216 HAO1Q9UJM8 370 aa12.06□□□□□ -0.48
PNKP-217ENST00000625216 PTRH2Q9Y3E5 179 aaKnown RBP12.06□□□□□ -0.48
PNKP-217ENST00000625216 A0A1B0GTL3 188 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 PEX12O00623 359 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 PPP6CO00743 305 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 UBFD1O14562 309 aaKnown RBP12.05□□□□□ -0.48
PNKP-217ENST00000625216 DSCR3O14972 297 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 KLHL41O60662 606 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 DNAJB5O75953 348 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 CCNDBP1O95273 360 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 ANXA5P08758 320 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 KITP10721 976 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 FOLR3P41439 243 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 PGDP52209 483 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 AP1S2P56377 157 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 ABATP80404 500 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 RELAQ04206 551 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 CDKL4Q5MAI5 379 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 WASHC2DQ5SRD0 308 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 TTLL10Q6ZVT0 673 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 OVCH1Q7RTY7 1134 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 GOLGA7Q7Z5G4 137 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 MCOLN3Q8TDD5 553 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 PPP4R1Q8TF05 950 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 TRMOQ9BU70 441 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 TRIM54Q9BYV2 358 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 SLC26A1Q9H2B4 701 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 CUTCQ9NTM9 273 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 RAP2CQ9Y3L5 183 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 ZNF451Q9Y4E5 1061 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 SPTBP11277 2137 aa12.05□□□□□ -0.48
PNKP-217ENST00000625216 OR2A25A4D2G3 310 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 TMEM233B4DJY2 109 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 K7EM74 188 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 CTSVO60911 334 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 TGDSO95455 350 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 TROVE2P10155 538 aaKnown RBP eCLIP12.04□□□□□ -0.48
PNKP-217ENST00000625216 IMPA1P29218 277 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 OTX2P32243 289 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 SLC6A12P48065 614 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 PNLIPRP1P54315 467 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 EMP3P54852 163 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 VSX2P58304 361 aaPredicted RBP12.04□□□□□ -0.48
PNKP-217ENST00000625216 CLCQ05315 142 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 PRDX1Q06830 199 aaKnown RBP12.04□□□□□ -0.48
PNKP-217ENST00000625216 GALNT1Q10472 559 aaPredicted RBP12.04□□□□□ -0.48
PNKP-217ENST00000625216 CHAF1BQ13112 559 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 FASTKQ14296 549 aaKnown RBP12.04□□□□□ -0.48
PNKP-217ENST00000625216 CPZQ66K79 652 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 FBXO42Q6P3S6 717 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 RNF44Q7L0R7 432 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 MAVSQ7Z434 540 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 CUZD1Q86UP6 607 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 PIWIL2Q8TC59 973 aaKnown RBP12.04□□□□□ -0.48
PNKP-217ENST00000625216 AGR3Q8TD06 166 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 AGAP11Q8TF27 550 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 SEC16BQ96JE7 1060 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 ZFYVE21Q9BQ24 234 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 DPH7Q9BTV6 452 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 CD244Q9BZW8 370 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 TRIM4Q9C037 500 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 WDR54Q9H977 334 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 KCNK13Q9HB14 408 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 MRPS30Q9NP92 439 aaKnown RBP12.04□□□□□ -0.48
PNKP-217ENST00000625216 SEMA4BQ9NPR2 832 aaPredicted RBP12.04□□□□□ -0.48
PNKP-217ENST00000625216 SLC22A11Q9NSA0 550 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 STOX2Q9P2F5 926 aaPredicted RBP12.04□□□□□ -0.48
PNKP-217ENST00000625216 KLHL14Q9P2G3 628 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 ZDHHC2Q9UIJ5 367 aa12.04□□□□□ -0.48
PNKP-217ENST00000625216 NXT1Q9UKK6 140 aaKnown RBP12.04□□□□□ -0.48
PNKP-217ENST00000625216 TNPO3Q9Y5L0 923 aaKnown RBP12.04□□□□□ -0.48
PNKP-217ENST00000625216 FLNBO75369 2602 aaKnown RBP12.04□□□□□ -0.48
PNKP-217ENST00000625216 TENM4Q6N022 2769 aa12.03□□□□□ -0.48
PNKP-217ENST00000625216 PCM1Q15154 2024 aa12.03□□□□□ -0.48
PNKP-217ENST00000625216 HYKKA2RU49 373 aa12.03□□□□□ -0.48
PNKP-217ENST00000625216 PABPN1LA6NDY0 278 aaKnown RBP12.03□□□□□ -0.48
PNKP-217ENST00000625216 E7ENX8 843 aa12.03□□□□□ -0.48
PNKP-217ENST00000625216 ZNF195O14628 629 aa12.03□□□□□ -0.48
PNKP-217ENST00000625216 CCNT2O60583 730 aaKnown RBP12.03□□□□□ -0.48
PNKP-217ENST00000625216 SLC16A8O95907 504 aa12.03□□□□□ -0.48
PNKP-217ENST00000625216 HIST1H2AGP0C0S8 130 aaPredicted RBP12.03□□□□□ -0.48
PNKP-217ENST00000625216 ALOX15P16050 662 aaPredicted RBP12.03□□□□□ -0.48
PNKP-217ENST00000625216 EPORP19235 508 aa12.03□□□□□ -0.48
PNKP-217ENST00000625216 HIST1H2ADP20671 130 aa12.03□□□□□ -0.48
PNKP-217ENST00000625216 HRH2P25021 359 aa12.03□□□□□ -0.48
PNKP-217ENST00000625216 PSMB5P28074 263 aa12.03□□□□□ -0.48
PNKP-217ENST00000625216 GGT5P36269 586 aa12.03□□□□□ -0.48
PNKP-217ENST00000625216 GDF5P43026 501 aa12.03□□□□□ -0.48
PNKP-217ENST00000625216 FOXK1P85037 733 aa12.03□□□□□ -0.48
PNKP-217ENST00000625216 TAP2Q03519 686 aa12.03□□□□□ -0.48
PNKP-217ENST00000625216 LCP2Q13094 533 aa12.03□□□□□ -0.48
PNKP-217ENST00000625216 ATP1A4Q13733 1029 aa12.03□□□□□ -0.48
PNKP-217ENST00000625216 GTF2H2Q13888 395 aa12.03□□□□□ -0.48
PNKP-217ENST00000625216 SH2D4BQ5SQS7 431 aa12.03□□□□□ -0.48
PNKP-217ENST00000625216 GKAP1Q5VSY0 366 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms