RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 TNFP01375 233 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 KLK1P06870 262 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 LYNP07948 512 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 F3P13726 295 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 DDCP20711 480 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 SRP54P61011 504 aaKnown RBP15.65■□□□□ 0.1
LDB3-208ENST00000623007 YBX1P67809 324 aaKnown RBP15.65■□□□□ 0.1
LDB3-208ENST00000623007 KIR2DS3Q14952 304 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 TRIM40Q6P9F5 258 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 TMEM154Q6P9G4 183 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 AMIGO2Q86SJ2 522 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 AMIGO1Q86WK6 493 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 ADHFE1Q8IWW8 467 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 AVL9Q8NBF6 648 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 HMGB4Q8WW32 186 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 LCN9Q8WX39 176 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 TBC1D20Q96BZ9 403 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 SLC47A1Q96FL8 570 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 SHDQ96IW2 340 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 NELL2Q99435 816 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 FAIM2Q9BWQ8 316 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 GSDMCQ9BYG8 508 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 ASPSCR1Q9BZE9 553 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 TAS2R9Q9NYW1 312 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 EHD3Q9NZN3 535 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 GMPR2Q9P2T1 348 aaKnown RBP15.65■□□□□ 0.1
LDB3-208ENST00000623007 DNAJB9Q9UBS3 223 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 ZNF639Q9UID6 485 aa15.65■□□□□ 0.1
LDB3-208ENST00000623007 H7BY64 318 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 NDUFS4O43181 175 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 CPSF4O95639 269 aaKnown RBP15.64■□□□□ 0.09
LDB3-208ENST00000623007 HPRP00739 348 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 DRD2P14416 443 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 CDKN2CP42773 168 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 TAS2R50P59544 299 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 TXNL4AP83876 142 aaKnown RBP15.64■□□□□ 0.09
LDB3-208ENST00000623007 MEF2AQ02078 507 aaPredicted RBP15.64■□□□□ 0.09
LDB3-208ENST00000623007 RELAQ04206 551 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 GPR155Q7Z3F1 870 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 VN1R5Q7Z5H4 357 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 ADCK2Q7Z695 626 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 RBM12BQ8IXT5 1001 aaKnown RBP15.64■□□□□ 0.09
LDB3-208ENST00000623007 GALNT4Q8N4A0 578 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 LMNTD1Q8N9Z9 388 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 OR2L3Q8NG85 312 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 OR4A15Q8NGL6 344 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 OR1E3Q8WZA6 343 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 MIEF2Q96C03 454 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 PRAP1Q96NZ9 151 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 SEPHS2Q99611 448 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 CIB1Q99828 191 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 SPNS1Q9H2V7 528 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 IKZF5Q9H5V7 419 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 PIF1Q9H611 641 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 DDX31Q9H8H2 851 aaKnown RBP15.64■□□□□ 0.09
LDB3-208ENST00000623007 PRDM8Q9NQV8 689 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 ZSCAN32Q9NX65 697 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 ENTPD2Q9Y5L3 495 aa15.64■□□□□ 0.09
LDB3-208ENST00000623007 C1orf226A1L170 272 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 PLPP1O14494 284 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 RASGRP1O95267 797 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 GSNP06396 782 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 STXBP1P61764 594 aaKnown RBP15.63■□□□□ 0.09
LDB3-208ENST00000623007 GTDC1Q4AE62 458 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 ADNP2Q6IQ32 1131 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 C11orf65Q8NCR3 313 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 ZFP90Q8TF47 636 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 THAP11Q96EK4 314 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 PYURFQ96I23 114 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 TBCDQ9BTW9 1192 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 ROGDIQ9GZN7 287 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 POT1Q9NUX5 634 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 CUEDC1Q9NWM3 386 aaPredicted RBP15.63■□□□□ 0.09
LDB3-208ENST00000623007 THUMPD1Q9NXG2 353 aaKnown RBP15.63■□□□□ 0.09
LDB3-208ENST00000623007 DUSP12Q9UNI6 340 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 CROCCQ5TZA2 2017 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 KIR2DS5A0A0G2JLQ3 304 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 A0A0G2JNG1 304 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 KIR2DS3K7RE56 304 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 KCNK5O95279 499 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 IFNA14P01570 189 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 CHRNB1P11230 501 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 TPP2P29144 1249 aaPredicted RBP15.63■□□□□ 0.09
LDB3-208ENST00000623007 ACTR1BP42025 376 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 CLDN2P57739 230 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 ACTR1AP61163 376 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 RPS15AP62244 130 aaKnown RBP15.63■□□□□ 0.09
LDB3-208ENST00000623007 KIR2DS5Q14953 304 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 MLC1Q15049 377 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 SF1Q15637 639 aaKnown RBP15.63■□□□□ 0.09
LDB3-208ENST00000623007 ADRM1Q16186 407 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.63■□□□□ 0.09
LDB3-208ENST00000623007 ZCCHC8Q6NZY4 707 aaKnown RBP15.63■□□□□ 0.09
LDB3-208ENST00000623007 DUS1LQ6P1R4 473 aaKnown RBP15.63■□□□□ 0.09
LDB3-208ENST00000623007 GJD3Q8N144 294 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 ZCCHC7Q8N3Z6 543 aaKnown RBP15.63■□□□□ 0.09
LDB3-208ENST00000623007 ANKRD53Q8N9V6 530 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 ZNF740Q8NDX6 193 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 OR52N2Q8NGI0 321 aa15.63■□□□□ 0.09
LDB3-208ENST00000623007 NUDT8Q8WV74 236 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms