RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 GSTM2P28161 218 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 TPP2P29144 1249 aaPredicted RBP20.5■□□□□ 0.87
SPAST-204ENST00000621856 HNRNPFP52597 415 aaKnown RBP20.5■□□□□ 0.87
SPAST-204ENST00000621856 FAM71E1Q6IPT2 247 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 ZNF425Q6IV72 752 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 RNF111Q6ZNA4 994 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 PTRH1Q86Y79 214 aaKnown RBP20.5■□□□□ 0.87
SPAST-204ENST00000621856 SPPL2CQ8IUH8 684 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 TMEFF1Q8IYR6 380 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 VPS37AQ8NEZ2 397 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.5■□□□□ 0.87
SPAST-204ENST00000621856 COQ8BQ96D53 544 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 CPPED1Q9BRF8 314 aaPredicted RBP20.5■□□□□ 0.87
SPAST-204ENST00000621856 IER2Q9BTL4 223 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 ATAD3AQ9NVI7 634 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 ACTR10Q9NZ32 417 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 EML5Q05BV3 1969 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 KLHL18O94889 574 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 STATHP02808 62 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 CSF2P04141 144 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 IL3P08700 152 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 NCK1P16333 377 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 UGT2B7P16662 529 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 BSGP35613 385 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 AHRP35869 848 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 MAPK12P53778 367 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 OR4D2P58180 307 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 MC1RQ01726 317 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 ELOCQ15369 112 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 AASDHQ4L235 1098 aaPredicted RBP20.5■□□□□ 0.87
SPAST-204ENST00000621856 IKBIPQ70UQ0 350 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 TRIM73Q86UV7 250 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 NUDT13Q86X67 352 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 CLECL1Q8IZS7 167 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 MFSD9Q8NBP5 474 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 PPCDCQ96CD2 204 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 EXO1Q9UQ84 846 aaKnown RBP20.5■□□□□ 0.87
SPAST-204ENST00000621856 PRSS51A0A1B0GVH4 220 aa20.49■□□□□ 0.87
SPAST-204ENST00000621856 AQP12BA6NM10 295 aa20.49■□□□□ 0.87
SPAST-204ENST00000621856 SCN2BO60939 215 aa20.49■□□□□ 0.87
SPAST-204ENST00000621856 FURINP09958 794 aa20.49■□□□□ 0.87
SPAST-204ENST00000621856 HOXB3P14651 431 aaPredicted RBP20.49■□□□□ 0.87
SPAST-204ENST00000621856 NME1P15531 152 aaKnown RBP20.49■□□□□ 0.87
SPAST-204ENST00000621856 EFNA1P20827 205 aaPredicted RBP20.49■□□□□ 0.87
SPAST-204ENST00000621856 ZIC1Q15915 447 aa20.49■□□□□ 0.87
SPAST-204ENST00000621856 TMEM35AQ53FP2 167 aa20.49■□□□□ 0.87
SPAST-204ENST00000621856 PAQR7Q86WK9 346 aa20.49■□□□□ 0.87
SPAST-204ENST00000621856 AQP12AQ8IXF9 295 aa20.49■□□□□ 0.87
SPAST-204ENST00000621856 PQLC1Q8N2U9 271 aa20.49■□□□□ 0.87
SPAST-204ENST00000621856 TRPV3Q8NET8 790 aa20.49■□□□□ 0.87
SPAST-204ENST00000621856 OR10A6Q8NH74 314 aa20.49■□□□□ 0.87
SPAST-204ENST00000621856 LMX1AQ8TE12 382 aa20.49■□□□□ 0.87
SPAST-204ENST00000621856 AURKBQ96GD4 344 aaPredicted RBP20.49■□□□□ 0.87
SPAST-204ENST00000621856 OR2A14Q96R47 310 aa20.49■□□□□ 0.87
SPAST-204ENST00000621856 ZNF717Q9BY31 904 aaPredicted RBP20.49■□□□□ 0.87
SPAST-204ENST00000621856 BHLHE41Q9C0J9 482 aaPredicted RBP20.49■□□□□ 0.87
SPAST-204ENST00000621856 IKZF5Q9H5V7 419 aa20.49■□□□□ 0.87
SPAST-204ENST00000621856 C6orf203Q9P0P8 240 aaPredicted RBP20.49■□□□□ 0.87
SPAST-204ENST00000621856 BTNL2Q9UIR0 455 aa20.49■□□□□ 0.87
SPAST-204ENST00000621856 DOLKQ9UPQ8 538 aa20.49■□□□□ 0.87
SPAST-204ENST00000621856 PCDHB3Q9Y5E6 796 aa20.49■□□□□ 0.87
SPAST-204ENST00000621856 AP1M2Q9Y6Q5 423 aa20.49■□□□□ 0.87
SPAST-204ENST00000621856 GON4LQ3T8J9 2241 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 FAM221BA6H8Z2 402 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 YY2O15391 372 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 HOXB9P17482 250 aaPredicted RBP20.48■□□□□ 0.87
SPAST-204ENST00000621856 PTPN6P29350 595 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 HHEXQ03014 270 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 DMWDQ09019 674 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 MUM1Q2TAK8 710 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 ZNF385BQ569K4 471 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 TJAP1Q5JTD0 557 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 ZNF621Q6ZSS3 439 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 PROSER1Q86XN7 944 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 GKN2Q86XP6 184 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 OR2T12Q8NG77 320 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 FLVCR1-AS1Q8TAF5 88 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 MTERF3Q96E29 417 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 ZNF583Q96ND8 569 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 CCDC115Q96NT0 180 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 SARGQ9BW04 601 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 MAGEL2Q9UJ55 1249 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 C15orf41Q9Y2V0 281 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 AP4S1Q9Y587 144 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 PCDHGA4Q9Y5G9 962 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 PCDHGA2Q9Y5H1 932 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 ABCA7Q8IZY2 2146 aa20.48■□□□□ 0.87
SPAST-204ENST00000621856 LRIT2A6NDA9 550 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 GSTA4O15217 222 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 PLA2G16P53816 162 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 PDE7AQ13946 482 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 TOR1AIP1Q5JTV8 583 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 OR4C11Q6IEV9 310 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 UBE3DQ7Z6J8 389 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 TNIP2Q8NFZ5 429 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 FAM120BQ96EK7 910 aaKnown RBP20.47■□□□□ 0.87
SPAST-204ENST00000621856 COPS7BQ9H9Q2 264 aaPredicted RBP20.47■□□□□ 0.87
SPAST-204ENST00000621856 MIEF1Q9NQG6 463 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 ADAM29Q9UKF5 820 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 ENTPD2Q9Y5L3 495 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms