RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ZNF572Q7Z3I7 529 aaPredicted RBP6.96□□□□□ -1.29
COLCA1-205ENST00000620864 LGI4Q8N135 537 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 UBE2J2Q8N2K1 259 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 CADM2Q8N3J6 435 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF808Q8N4W9 903 aaPredicted RBP6.96□□□□□ -1.29
COLCA1-205ENST00000620864 SHC3Q92529 594 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 GLOD4Q9HC38 313 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 CYP8B1Q9UNU6 501 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 CA5BQ9Y2D0 317 aa6.96□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF821O75541 412 aaPredicted RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 RAD51DO75771 328 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 RAB4AP20338 218 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 FMO3P31513 532 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 SHMT1P34896 483 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 SPAM1P38567 509 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 PCK2Q16822 640 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 C14orf28Q4W4Y0 310 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 METTL11BQ5VVY1 283 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 TMEM214Q6NUQ4 689 aaKnown RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 LIX1Q8N485 282 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 ESX1Q8N693 406 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 YIPF7Q8N8F6 280 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 AVL9Q8NBF6 648 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 OR52J3Q8NH60 311 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 ZNF578Q96N58 590 aaPredicted RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 OR2M4Q96R27 311 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 GPR20Q99678 358 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 ASPNQ9BXN1 380 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 OR51V1Q9H2C8 321 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 TFB2MQ9H5Q4 396 aaKnown RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 IPPKQ9H8X2 491 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 PAQR5Q9NXK6 330 aaPredicted RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 KLHL42Q9P2K6 505 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 NOX1Q9Y5S8 564 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 COL14A1Q05707 1796 aaKnown RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 SBK2P0C263 348 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 MAN2A2P49641 1150 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 SCARB2Q14108 478 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 UGT3A2Q3SY77 523 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 CHRFAM7AQ494W8 412 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 CELF3Q5SZQ8 465 aaKnown RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 DNAAF1Q8NEP3 725 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 PROKR2Q8NFJ6 384 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 OR6K6Q8NGW6 343 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 OR8D1Q8WZ84 308 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 CCDC120Q96HB5 630 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 ZNF419Q96HQ0 510 aaPredicted RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 ZNF597Q96LX8 424 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 C11orf84Q9BUA3 381 aaPredicted RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 AGXT2Q9BYV1 514 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 STXBP5LQ9Y2K9 1186 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 HCRTR2O43614 444 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 COQ9O75208 318 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 SC5DO75845 299 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 PTGER3P43115 390 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 FNTBP49356 437 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 OR12D2P58182 307 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 ERVK-21P61565 698 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 CRADDP78560 199 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 COTL1Q14019 142 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 RFTN1Q14699 578 aaPredicted RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 GDF6Q6KF10 455 aaPredicted RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 GDPGP1Q6ZNW5 385 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 KCTD9Q7L273 389 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 BANPQ8N9N5 519 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 C10orf82Q8WW14 230 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 CHFRQ96EP1 664 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 MAF1Q9H063 256 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 CA14Q9ULX7 337 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 CICQ96RK0 1608 aaPredicted RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 ZNF726A6NNF4 738 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 CASC3O15234 703 aaKnown RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 LCMT2O60294 686 aaKnown RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 CLDN11O75508 207 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 RGS9O75916 674 aaPredicted RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 BCAS2O75934 225 aaPredicted RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 NDST3O95803 873 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 USP17L7P0C7H9 530 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 NR4A2P43354 598 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 RAB8AP61006 207 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 OC90Q02509 493 aaPredicted RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 CCL14Q16627 93 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 CLVS2Q5SYC1 327 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 TMPRSS11BQ86T26 416 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 LRRC52Q8N7C0 313 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 OR8K5Q8NH50 307 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 TAAR8Q969N4 342 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 SYT3Q9BQG1 590 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 MRPL45Q9BRJ2 306 aaKnown RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 PDCD2LQ9BRP1 358 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 URM1Q9BTM9 101 aaKnown RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 DUSP26Q9BV47 211 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 PRDM12Q9H4Q4 367 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 ZNF696Q9H7X3 374 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 PHPT1Q9NRX4 125 aaPredicted RBP6.96□□□□□ -1.3
COLCA1-205ENST00000620864 GSKIPQ9P0R6 139 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 PHYHO14832 338 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 RFPL3O75679 317 aa6.96□□□□□ -1.3
COLCA1-205ENST00000620864 ELFN1P0C7U0 828 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms