RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 FXNQ16595 210 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 PROX2Q3B8N5 592 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 TIMM50Q3ZCQ8 353 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 FAM209AQ5JX71 171 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 TPGS2Q68CL5 300 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 C11orf88Q6PI97 169 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 ADGRG2Q8IZP9 1017 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 SLC34A3Q8N130 599 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 SLC5A8Q8N695 610 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 KREMEN2Q8NCW0 462 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 OR9Q2Q8NGE9 314 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 GPR150Q8NGU9 434 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 SMG7Q92540 1137 aaKnown RBP6.71□□□□□ -1.33
NEDD9-216ENST00000620854 COPS8Q99627 209 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 CCM2Q9BSQ5 444 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 ACPTQ9BZG2 426 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 SYNDIG1Q9H7V2 258 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 CCNB1IP1Q9NPC3 277 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 KLHL28Q9NXS3 571 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 RPS6KA6Q9UK32 745 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 PCDHGB1Q9Y5G3 927 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 PCDHGA6Q9Y5G7 932 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 PRSS21Q9Y6M0 314 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 ZFP37Q9Y6Q3 630 aaPredicted RBP6.71□□□□□ -1.33
NEDD9-216ENST00000620854 DOCK1Q14185 1865 aa6.71□□□□□ -1.33
NEDD9-216ENST00000620854 EIF3FO00303 357 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-216ENST00000620854 TNFRSF10BO14763 440 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 INSIG1O15503 277 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 SNX4O95219 450 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 APOL3O95236 402 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 PTTG1O95997 202 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 PRLP01236 227 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 GALTP07902 379 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 PRKCAP17252 672 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 JUNDP17535 347 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 ACVR2AP27037 513 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 CCT3P49368 545 aaKnown RBP6.71□□□□□ -1.34
NEDD9-216ENST00000620854 RGS6P49758 472 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 CDC42P60953 191 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 CDC20Q12834 499 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 COX10Q12887 443 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 BAK1Q16611 211 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 SMU1Q2TAY7 513 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 CAPN13Q6MZZ7 669 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-216ENST00000620854 PNCKQ6P2M8 343 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 LSRQ86X29 649 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-216ENST00000620854 GPR151Q8TDV0 419 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 ASZ1Q8WWH4 475 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 AUTS2Q8WXX7 1259 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 CCDC115Q96NT0 180 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 SLC30A2Q9BRI3 323 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 SLC7A5P2Q9GIP4 190 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 ELAC1Q9H777 363 aaKnown RBP6.71□□□□□ -1.34
NEDD9-216ENST00000620854 GKN1Q9NS71 199 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 PPT2Q9UMR5 302 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 CKAP5Q14008 2032 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 OR6C70A6NIJ9 312 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 SLC38A8A6NNN8 435 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 SMLR1H3BR10 107 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 J3KTA2 159 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 RFXAPO00287 272 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 MANBAO00462 879 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 CCL16O15467 120 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 PRAMEF11O60813 436 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 CCNDBP1O95273 360 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 CORO1AP31146 461 aaKnown RBP6.71□□□□□ -1.34
NEDD9-216ENST00000620854 KIR3DL1P43629 444 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 TUBA1BP68363 451 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 CYP4F8P98187 520 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 PTSQ03393 145 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.71□□□□□ -1.34
NEDD9-216ENST00000620854 E2F2Q14209 437 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 ARTNQ5T4W7 220 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 ZNF544Q6NX49 715 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 SYCE2Q6PIF2 218 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 TUBA1AQ71U36 451 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 BCDIN3DQ7Z5W3 292 aaKnown RBP6.71□□□□□ -1.34
NEDD9-216ENST00000620854 SERPINA9Q86WD7 417 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 KRT73Q86Y46 540 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 RAB43Q86YS6 212 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 GPR65Q8IYL9 337 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 FLCNQ8NFG4 579 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 GFM1Q96RP9 751 aaKnown RBP6.71□□□□□ -1.34
NEDD9-216ENST00000620854 NIPSNAP1Q9BPW8 284 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 RHBGQ9H310 441 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 CLMPQ9H6B4 373 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 POPDC3Q9HBV1 291 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 TM9SF3Q9HD45 589 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 SLC9A8Q9Y2E8 581 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 CLDN24A6NM45 220 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 FAM227AF5H4B4 570 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 TNFRSF11BO00300 401 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 SUV39H1O43463 412 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 STK16O75716 305 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 PRAMEF1O95521 474 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 ADORA3P0DMS8 318 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 ITGAMP11215 1152 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 POLR2EP19388 210 aaKnown RBP6.71□□□□□ -1.34
NEDD9-216ENST00000620854 CLCN7P51798 805 aa6.71□□□□□ -1.34
NEDD9-216ENST00000620854 ZNF45Q02386 682 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms