RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 TMEM151BQ8IW70 566 aa17.33■□□□□ 0.36
LITAF-220ENST00000620789 UTP15Q8TED0 518 aaKnown RBP17.33■□□□□ 0.36
LITAF-220ENST00000620789 ZNF483Q8TF39 744 aaPredicted RBP17.33■□□□□ 0.36
LITAF-220ENST00000620789 THAP4Q8WY91 577 aa17.33■□□□□ 0.36
LITAF-220ENST00000620789 EXTL1Q92935 676 aa17.33■□□□□ 0.36
LITAF-220ENST00000620789 MIEF2Q96C03 454 aa17.33■□□□□ 0.36
LITAF-220ENST00000620789 NSUN5Q96P11 429 aaKnown RBP17.33■□□□□ 0.36
LITAF-220ENST00000620789 YIPF2Q9BWQ6 316 aa17.33■□□□□ 0.36
LITAF-220ENST00000620789 AICDAQ9GZX7 198 aa17.33■□□□□ 0.36
LITAF-220ENST00000620789 KLHL31Q9H511 634 aa17.33■□□□□ 0.36
LITAF-220ENST00000620789 SOX17Q9H6I2 414 aaPredicted RBP17.33■□□□□ 0.36
LITAF-220ENST00000620789 NOL11Q9H8H0 719 aaKnown RBP17.33■□□□□ 0.36
LITAF-220ENST00000620789 ZBTB26Q9HCK0 441 aa17.33■□□□□ 0.36
LITAF-220ENST00000620789 MKKSQ9NPJ1 570 aaPredicted RBP17.33■□□□□ 0.36
LITAF-220ENST00000620789 LRIT2A6NDA9 550 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 FFAR3O14843 346 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 GPR42O15529 346 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 PLIN3O60664 434 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 GALR3O60755 368 aaPredicted RBP17.32■□□□□ 0.36
LITAF-220ENST00000620789 RDH16O75452 317 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 TBX6O95947 436 aaPredicted RBP17.32■□□□□ 0.36
LITAF-220ENST00000620789 SMIM10L1P0DMW3 83 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 SERPINB1P30740 379 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 OTX2P32243 289 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 HPDP32754 393 aaPredicted RBP17.32■□□□□ 0.36
LITAF-220ENST00000620789 CCNG1P51959 295 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 HERVK_113P63132 956 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 KRT71Q3SY84 523 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 DEFB134Q4QY38 66 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 VWA2Q5GFL6 755 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 ZNF678Q5SXM1 525 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 SHISA6Q6ZSJ9 500 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 SRRM1Q8IYB3 904 aaKnown RBP17.32■□□□□ 0.36
LITAF-220ENST00000620789 IQCKQ8N0W5 287 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 L3MBTL4Q8NA19 623 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 OR7G3Q8NG95 312 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 OR52B6Q8NGF0 335 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 ATP6V1E2Q96A05 226 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 GAL3ST3Q96A11 431 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 SMIM10Q96HG1 83 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 APOPT1Q96IL0 206 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 TMEM237Q96Q45 408 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 UBL7Q96S82 380 aaPredicted RBP17.32■□□□□ 0.36
LITAF-220ENST00000620789 NTMT1Q9BV86 223 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 ERVK-6Q9BXR3 956 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 TGIF2Q9GZN2 237 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 SEMA4BQ9NPR2 832 aaPredicted RBP17.32■□□□□ 0.36
LITAF-220ENST00000620789 C14orf105Q9NVL8 296 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 MKS1Q9NXB0 559 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 MAN2B2Q9Y2E5 1009 aa17.32■□□□□ 0.36
LITAF-220ENST00000620789 CCDC88CQ9P219 2028 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 C4orf51C9J302 202 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 G3V2L1 256 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 H0YIV9 168 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 CLDN9O95484 217 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 B3GALT4O96024 378 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 MYL2P10916 166 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 PCNAP12004 261 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 IMPDH1P20839 514 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 HNRNPH1P31943 449 aaKnown RBP17.31■□□□□ 0.36
LITAF-220ENST00000620789 ARL1P40616 181 aaPredicted RBP17.31■□□□□ 0.36
LITAF-220ENST00000620789 PRKAA2P54646 552 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 RAB8AP61006 207 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 KLC1Q07866 573 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 TRAF3Q13114 568 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 ADPRMQ3LIE5 342 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 ZYG11AQ6WRX3 759 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 RPS27LQ71UM5 84 aaKnown RBP17.31■□□□□ 0.36
LITAF-220ENST00000620789 PRSS58Q8IYP2 241 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 BANPQ8N9N5 519 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 RDH11Q8TC12 318 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 ZNF473Q8WTR7 871 aaKnown RBP17.31■□□□□ 0.36
LITAF-220ENST00000620789 MS4A6EQ96DS6 147 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 CCDC126Q96EE4 140 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 IP6K3Q96PC2 410 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 ZIM3Q96PE6 472 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 CDK15Q96Q40 435 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 HCN3Q9P1Z3 774 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 ADGRE2Q9UHX3 823 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 RNF11Q9Y3C5 154 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 TSC22D4Q9Y3Q8 395 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 PCDHGA11Q9Y5H2 935 aa17.31■□□□□ 0.36
LITAF-220ENST00000620789 CACNA1GO43497 2377 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 ZNF860A6NHJ4 632 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 ERI3O43414 337 aaKnown RBP17.3■□□□□ 0.36
LITAF-220ENST00000620789 SUPT7LO94864 414 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 MMP11P24347 488 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 CCR10P46092 362 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 CDH13P55290 713 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 CPSF6Q16630 551 aaKnown RBP eCLIP17.3■□□□□ 0.36
LITAF-220ENST00000620789 LINC00303Q3SY05 128 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 UNC50Q53HI1 259 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 PCSK4Q6UW60 755 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 PPP1R32Q7Z5V6 425 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 MRGPREQ86SM8 312 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 ZC3H7AQ8IWR0 971 aaKnown RBP17.3■□□□□ 0.36
LITAF-220ENST00000620789 OR2L5Q8NG80 312 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 OR51Q1Q8NH59 317 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 PPP4R1Q8TF05 950 aa17.3■□□□□ 0.36
LITAF-220ENST00000620789 APOBEC4Q8WW27 367 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms