RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 FAM74A1Q5RGS3 127 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 CRYBG2Q8N1P7 616 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 OR4C6Q8NH72 309 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 HSD17B14Q9BPX1 270 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 TM9SF3Q9HD45 589 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 PPEF2O14830 753 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 PSMD10O75832 226 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ANXA4P09525 319 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 UGT2B7P16662 529 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 AKR1C4P17516 323 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 DNAJB1P25685 340 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 S100A7P31151 101 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ACVR1BP36896 505 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 PAQR3Q6TCH7 311 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 NAXEQ8NCW5 288 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 RHOXF1Q8NHV9 184 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 UPF1Q92900 1129 aaKnown RBP eCLIP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 P2RY13Q9BPV8 354 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 SCPEP1Q9HB40 452 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ATP13A2Q9NQ11 1180 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 G3V2L1 256 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 CD3GP09693 182 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 PGAM2P15259 253 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 SHMT1P34896 483 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 CDKN2DP55273 166 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 GRB14Q14449 540 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ZMAT1Q5H9K5 638 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 FAM171BQ6P995 826 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 SMARCD1Q96GM5 515 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 PKMYT1Q99640 499 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 THAP7Q9BT49 309 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 EMCNQ9ULC0 261 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 TULP4Q9NRJ4 1543 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 MEIS2O14770 477 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 CTBP2P56545 445 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 LCP2Q13094 533 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 AANATQ16613 207 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 VASNQ6EMK4 673 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 BCDIN3DQ7Z5W3 292 aaKnown RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 TP53INP2Q8IXH6 220 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 SECISBP2Q96T21 854 aaKnown RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 PINK1Q9BXM7 581 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 AGO3Q9H9G7 860 aaKnown RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 VNN3Q9NY84 501 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 RPL36Q9Y3U8 105 aaKnown RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 CACNG2Q9Y698 323 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 MYH7BA7E2Y1 1941 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 GADD45GO95257 159 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 EBLN1P0CF75 366 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 RFC2P35250 354 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 PTH2RP49190 550 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 EEFSECP57772 596 aaKnown RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF791Q3KP31 576 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 NCEH1Q6PIU2 408 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF454Q8N9F8 522 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 MRPS31Q92665 395 aaKnown RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 NELL2Q99435 816 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 IMP3Q9NV31 184 aaKnown RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ATF5Q9Y2D1 282 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 CFAP20Q9Y6A4 193 aaKnown RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 TRIM23P36406 574 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 RTL4Q6ZR62 310 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 CACUL1Q86Y37 369 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 OR13F1Q8NGS4 319 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 NEIL3Q8TAT5 605 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 LGR4Q9BXB1 951 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 SMIM3Q9BZL3 60 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ARHGEF5Q12774 1597 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 LOC102724200A0A096LPH7 203 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ESR1P03372 595 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 CLUP10909 449 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 MLF1P58340 268 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 MAP1SQ66K74 1059 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 OR4F3Q6IEY1 312 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 NFKBIZQ9BYH8 718 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 DLGAP4Q9Y2H0 992 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ASB4Q9Y574 426 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 CASZ1Q86V15 1759 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 LOC105371267A0A1B0GV96 52 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 IFNW1P05000 195 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 IRF8Q02556 426 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 SLC25A11Q02978 314 aaKnown RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 APOFQ13790 326 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 ZBTB6Q15916 424 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 PEG10Q86TG7 708 aaKnown RBP4.88□□□□□ -1.63
VPS13D-214ENST00000620676 GALNT13Q8IUC8 556 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 C11orf65Q8NCR3 313 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 HYLS1Q96M11 299 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 SEMA3CQ99985 751 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 MGME1Q9BQP7 344 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 PRKD2Q9BZL6 878 aa4.88□□□□□ -1.63
VPS13D-214ENST00000620676 USP31Q70CQ4 1352 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 A0A0A6YYJ9 748 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 C1RP00736 705 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 ARAFP10398 606 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF250P15622 560 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 TBX4P57082 545 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 MGAT3Q09327 533 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 GRIK2Q13002 908 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 AQP6Q13520 282 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms