RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 VPS4AQ9UN37 437 aa18.23■□□□□ 0.51
PSPC1-206ENST00000619300 TNFRSF10CO14798 259 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 LCMT2O60294 686 aaKnown RBP18.22■□□□□ 0.51
PSPC1-206ENST00000619300 KDM1AO60341 852 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 DEAF1O75398 565 aaPredicted RBP18.22■□□□□ 0.51
PSPC1-206ENST00000619300 SERPINA1P01009 418 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 PPIBP23284 216 aaKnown RBP18.22■□□□□ 0.51
PSPC1-206ENST00000619300 NKG7Q16617 165 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 OR52E8Q6IFG1 317 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 ERICH5Q6P6B1 374 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 WASH2PQ6VEQ5 465 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 OR4A15Q8NGL6 344 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 GOT1L1Q8NHS2 421 aaPredicted RBP18.22■□□□□ 0.51
PSPC1-206ENST00000619300 SLC47A1Q96FL8 570 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 VPS50Q96JG6 964 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 ZNF717Q9BY31 904 aaPredicted RBP18.22■□□□□ 0.51
PSPC1-206ENST00000619300 NTN4Q9HB63 628 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 ZNF639Q9UID6 485 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 NDRG2Q9UN36 371 aaKnown RBP18.22■□□□□ 0.51
PSPC1-206ENST00000619300 PRICKLE3O43900 615 aaPredicted RBP18.22■□□□□ 0.51
PSPC1-206ENST00000619300 PRSS23O95084 383 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 CCNDBP1O95273 360 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 IL3P08700 152 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 AKT2P31751 481 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 VMACQ2NL98 169 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 PAGE2Q7Z2X7 111 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 ADCK2Q7Z695 626 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 ZZZ3Q8IYH5 903 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 FLCNQ8NFG4 579 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 ZFP90Q8TF47 636 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 MAGIXQ9H6Y5 334 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 KIR3DX1Q9H7L2 352 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 ZNF282Q9UDV7 671 aaPredicted RBP18.22■□□□□ 0.51
PSPC1-206ENST00000619300 PCDHGB4Q9UN71 923 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 CORO2BQ9UQ03 480 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 WBP11Q9Y2W2 641 aaKnown RBP18.22■□□□□ 0.51
PSPC1-206ENST00000619300 PCDHGB5Q9Y5G0 923 aa18.22■□□□□ 0.51
PSPC1-206ENST00000619300 TMEM265A0A087WTH1 108 aa18.21■□□□□ 0.51
PSPC1-206ENST00000619300 GPR37L1O60883 481 aa18.21■□□□□ 0.51
PSPC1-206ENST00000619300 SEMA4FO95754 770 aa18.21■□□□□ 0.51
PSPC1-206ENST00000619300 HOXB6P17509 224 aaKnown RBP18.21■□□□□ 0.51
PSPC1-206ENST00000619300 AK4P27144 223 aaPredicted RBP18.21■□□□□ 0.51
PSPC1-206ENST00000619300 BSGP35613 385 aa18.21■□□□□ 0.51
PSPC1-206ENST00000619300 YPEL5P62699 121 aa18.21■□□□□ 0.51
PSPC1-206ENST00000619300 ABATP80404 500 aa18.21■□□□□ 0.51
PSPC1-206ENST00000619300 TXNL4AP83876 142 aaKnown RBP18.21■□□□□ 0.51
PSPC1-206ENST00000619300 GK3PQ14409 553 aa18.21■□□□□ 0.51
PSPC1-206ENST00000619300 ADRM1Q16186 407 aa18.21■□□□□ 0.51
PSPC1-206ENST00000619300 CHERPQ8IWX8 916 aaKnown RBP18.21■□□□□ 0.51
PSPC1-206ENST00000619300 PGBD3Q8N328 593 aa18.21■□□□□ 0.51
PSPC1-206ENST00000619300 PNPT1Q8TCS8 783 aaKnown RBP18.21■□□□□ 0.51
PSPC1-206ENST00000619300 QRFPRQ96P65 431 aa18.21■□□□□ 0.51
PSPC1-206ENST00000619300 MRPS30Q9NP92 439 aaKnown RBP18.21■□□□□ 0.51
PSPC1-206ENST00000619300 USP36Q9P275 1121 aaKnown RBP18.21■□□□□ 0.51
PSPC1-206ENST00000619300 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.21■□□□□ 0.51
PSPC1-206ENST00000619300 HS3ST3A1Q9Y663 406 aa18.21■□□□□ 0.51
PSPC1-206ENST00000619300 RTCAO00442 366 aaKnown RBP18.2■□□□□ 0.5
PSPC1-206ENST00000619300 DLGAP1O14490 977 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 CAPN5O15484 640 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-206ENST00000619300 EML2O95834 649 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 NDUFS1P28331 727 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 HBA1P69905 142 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 MPEG1Q2M385 716 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 LRIT3Q3SXY7 679 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 PTOV1Q86YD1 416 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 EID3Q8N140 333 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 TFAP2CQ92754 450 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 CIDECQ96AQ7 238 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-206ENST00000619300 RGMAQ96B86 450 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 PYURFQ96I23 114 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 SPATA9Q9BWV2 254 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 POLMQ9NP87 494 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-206ENST00000619300 TMEM184CQ9NVA4 438 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 PCOLCE2Q9UKZ9 415 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 TRBC2A0A5B9 178 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 C10orf142B7Z368 130 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 UPK1AO00322 258 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 CLEC3AO75596 197 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 C6orf47O95873 294 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 ABCB1P08183 1280 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-206ENST00000619300 SRFP11831 508 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 ZNF23P17027 643 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 MAPK12P53778 367 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 GAB1Q13480 694 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 PLD3Q8IV08 490 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 TTLQ8NG68 377 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 CCL4L1Q8NHW4 92 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 TMEM168Q9H0V1 697 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 UBE2ZQ9H832 354 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-206ENST00000619300 SLC2A4RGQ9NR83 387 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 DNAJB9Q9UBS3 223 aa18.2■□□□□ 0.5
PSPC1-206ENST00000619300 PNMA8BQ9ULN7 279 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-206ENST00000619300 EI24O14681 340 aa18.19■□□□□ 0.5
PSPC1-206ENST00000619300 FAM58BPP0C7Q3 252 aa18.19■□□□□ 0.5
PSPC1-206ENST00000619300 CLCN2P51788 898 aa18.19■□□□□ 0.5
PSPC1-206ENST00000619300 SRP54P61011 504 aaKnown RBP18.19■□□□□ 0.5
PSPC1-206ENST00000619300 RGNQ15493 299 aa18.19■□□□□ 0.5
PSPC1-206ENST00000619300 TCEA2Q15560 299 aa18.19■□□□□ 0.5
PSPC1-206ENST00000619300 PRSS53Q2L4Q9 553 aa18.19■□□□□ 0.5
PSPC1-206ENST00000619300 Q6ZSR6 202 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms