RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 GUCA1CO95843 209 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 DLGAP3O95886 979 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 CYC1P08574 325 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 EBLN1P0CF75 366 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 PCSK2P16519 638 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 NPPBP16860 134 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 ZNF28P17035 718 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 EPORP19235 508 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 TFEBP19484 476 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 MAGP20916 626 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 VARSP26640 1264 aaKnown RBP5.02□□□□□ -1.61
SHMT1-211ENST00000618902 SLC26A3P40879 764 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 STAT5AP42229 794 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 GRIA3P42263 894 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 GDF5P43026 501 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 GCGRP47871 477 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 SLC6A12P48065 614 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 GLRBP48167 497 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 PPM1FP49593 454 aaPredicted RBP5.02□□□□□ -1.61
SHMT1-211ENST00000618902 SERPINB8P50452 374 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 MAPK10P53779 464 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 ARSFP54793 590 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 ABCE1P61221 599 aaKnown RBP5.02□□□□□ -1.61
SHMT1-211ENST00000618902 TBPL1P62380 186 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 RPS15P62841 145 aaKnown RBP5.02□□□□□ -1.61
SHMT1-211ENST00000618902 ABATP80404 500 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 MXRA7P84157 204 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 ROR2Q01974 943 aaKnown RBP5.02□□□□□ -1.61
SHMT1-211ENST00000618902 BTKQ06187 659 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 SRSF6Q13247 344 aaKnown RBP5.02□□□□□ -1.61
SHMT1-211ENST00000618902 SP140Q13342 867 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 MED21Q13503 144 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 HERC3Q15034 1050 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 RCN1Q15293 331 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 MAPRE2Q15555 327 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 GPR19Q15760 415 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 DEFB110Q30KQ9 67 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 TECRLQ5HYJ1 363 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 C1orf146Q5VVC0 180 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 IRAK1BP1Q5VVH5 260 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 ANKS6Q68DC2 871 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 ZNF425Q6IV72 752 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 NIPAL1Q6NVV3 410 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 C16orf46Q6P387 395 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 FIGLAQ6QHK4 219 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 AGTRAPQ6RW13 159 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 PLD3Q8IV08 490 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 TMEM151BQ8IW70 566 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 KLHDC8AQ8IYD2 350 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 GPR135Q8IZ08 494 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 SHISA5Q8N114 240 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 FBXW8Q8N3Y1 598 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 DNAJC22Q8N4W6 341 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 DTWD1Q8N5C7 304 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 CPSF7Q8N684 471 aaKnown RBP5.02□□□□□ -1.61
SHMT1-211ENST00000618902 GOLM1Q8NBJ4 401 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 C7orf57Q8NEG2 295 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 ADCY4Q8NFM4 1077 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 OR2L3Q8NG85 312 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 OR56A3Q8NH54 315 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 OR1L3Q8NH93 324 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 SMPDL3AQ92484 453 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 NKD1Q969G9 470 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 POP5Q969H6 163 aaKnown RBP5.02□□□□□ -1.61
SHMT1-211ENST00000618902 GFM2Q969S9 779 aaKnown RBP5.02□□□□□ -1.61
SHMT1-211ENST00000618902 KIAA1191Q96A73 305 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 ESAMQ96AP7 390 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 PYCR2Q96C36 320 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 RHBDF1Q96CC6 855 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 DTNBP1Q96EV8 351 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 MVB12AQ96EY5 273 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 MED8Q96G25 268 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 CCDC138Q96M89 665 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 DCBLD2Q96PD2 775 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 TSC22D3Q99576 134 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 MIPEPQ99797 713 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 CENPKQ9BS16 269 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 TMEM79Q9BSE2 394 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 ULBP3Q9BZM4 244 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 NMUR2Q9GZQ4 415 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 SPNS1Q9H2V7 528 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 ALG9Q9H6U8 611 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 AKIRIN1Q9H9L7 192 aaPredicted RBP5.02□□□□□ -1.61
SHMT1-211ENST00000618902 EFCAB1Q9HAE3 211 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 ACSS2Q9NR19 701 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 FGF21Q9NSA1 209 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 PCMTD2Q9NV79 361 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 TMEM45AQ9NWC5 275 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 COPG2Q9UBF2 871 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 TAC3Q9UHF0 121 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 G3BP2Q9UN86 482 aaKnown RBP5.02□□□□□ -1.61
SHMT1-211ENST00000618902 PADI2Q9Y2J8 665 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 ACOT9Q9Y305 439 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 OARD1Q9Y530 152 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 B3GALT1Q9Y5Z6 326 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 TENM4Q6N022 2769 aa5.02□□□□□ -1.61
SHMT1-211ENST00000618902 SETXQ7Z333 2677 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 SPTBN1Q01082 2364 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 SPTAN1Q13813 2472 aaKnown RBP5.01□□□□□ -1.61
SHMT1-211ENST00000618902 CCDC88CQ9P219 2028 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms