RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 RNASE8Q8TDE3 154 aaKnown RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 BRIX1Q8TDN6 353 aaKnown RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 HAS1Q92839 578 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 PSMG2Q969U7 264 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 RNF145Q96MT1 663 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 ZNF607Q96SK3 696 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 ZIC5Q96T25 663 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 PCDHB18PQ96TA0 734 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 LGMNQ99538 433 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 CPPED1Q9BRF8 314 aaPredicted RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 NAT9Q9BTE0 207 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 SMOC2Q9H3U7 446 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 RANBP3Q9H6Z4 567 aaPredicted RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 ARMT1Q9H993 441 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 ZFP14Q9HCL3 533 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 PARD6AQ9NPB6 346 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 DNAJC17Q9NVM6 304 aaKnown RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 WSB2Q9NYS7 404 aaPredicted RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 STOX2Q9P2F5 926 aaPredicted RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 MYEF2Q9P2K5 600 aaKnown RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 BCAP29Q9UHQ4 241 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 MGAT4AQ9UM21 535 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 NDRG2Q9UN36 371 aaKnown RBP3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 COPS3Q9UNS2 423 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 MMACHCQ9Y4U1 282 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 CORINQ9Y5Q5 1042 aa3.93□□□□□ -1.78
UBE2D3-233ENST00000618836 RIC1Q4ADV7 1423 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 MED23Q9ULK4 1368 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 MGAT4DA6NG13 374 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 CBY3A6NI87 242 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 CD8B2A6NJW9 211 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 LIPT2A6NK58 231 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 CHMP2AO43633 222 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 PRKYO43930 277 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 CCNT2O60583 730 aaKnown RBP3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 NDUFS2O75306 463 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 LEFTY1O75610 366 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 CXCL14O95715 111 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 ERBB2P04626 1255 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 IFNA4P05014 189 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 CSF1RP07333 972 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 H2AFB1P0C5Y9 115 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 TMEM191BP0C7N4 346 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 EIF2AK2P19525 551 aaKnown RBP3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 CYP2F1P24903 491 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 ARRB1P49407 418 aaPredicted RBP3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 UCP2P55851 309 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 RAB1AP62820 205 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 KCNJ2P63252 427 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 SP2Q02086 613 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 IRF8Q02556 426 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 GABPAQ06546 454 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 FOXM1Q08050 763 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 ALCAMQ13740 583 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 GPR68Q15743 365 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 SLC36A3Q495N2 470 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 NRN1LQ496H8 165 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 AGAP7PQ5VUJ5 663 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 HACD4Q5VWC8 232 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 ANKS6Q68DC2 871 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 FSTL4Q6MZW2 842 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 ZSCAN25Q6NSZ9 544 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 KIAA1211LQ6NV74 962 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 RWDD4Q6NW29 188 aaKnown RBP3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 VWA1Q6PCB0 445 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 TMEM88Q6PEY1 159 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 LRRC74BQ6ZQY2 392 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 SYT13Q7L8C5 426 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 SSX9Q7RTT3 188 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 CCDC60Q8IWA6 550 aaPredicted RBP3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 EID3Q8N140 333 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 STK40Q8N2I9 435 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 KYQ8NBH2 561 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 MCUQ8NE86 351 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 CATSPER1Q8NEC5 780 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.92□□□□□ -1.785e-17■□□□□ 9.4
UBE2D3-233ENST00000618836 DNAJB14Q8TBM8 379 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 ACTRT1Q8TDG2 376 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 ATOH1Q92858 354 aaPredicted RBP3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 RNF166Q96A37 237 aaPredicted RBP3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 TESCQ96BS2 214 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 FOXRED1Q96CU9 486 aaPredicted RBP3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 MBOAT7Q96N66 472 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 FDXACB1Q9BRP7 624 aaPredicted RBP3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 HTATIP2Q9BUP3 242 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 CPEB1Q9BZB8 566 aaKnown RBP3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 TP63Q9H3D4 680 aaPredicted RBP3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 SLA2Q9H6Q3 261 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 SUSD2Q9UGT4 822 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 HACL1Q9UJ83 578 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 POU2F3Q9UKI9 436 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 HSF4Q9ULV5 492 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 RBMX2Q9Y388 322 aaKnown RBP3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 ASB1Q9Y576 335 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 PCDHGC4Q9Y5F7 938 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 EYSQ5T1H1 3165 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 OOEPA6NGQ2 149 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 A6NIZ1 184 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 KLRC4-KLRK1H3BQV0 150 aa3.92□□□□□ -1.78
UBE2D3-233ENST00000618836 HSPA12AO43301 675 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms