RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 DNAJC1Q96KC8 554 aaKnown RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 FOPNLQ96NB1 174 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 USB1Q9BQ65 265 aaKnown RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 ANP32EQ9BTT0 268 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 DPH7Q9BTV6 452 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 PRR14Q9BWN1 585 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 GRIP2Q9C0E4 1043 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 SPTLC3Q9NUV7 552 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 ZC3H7BQ9UGR2 993 aaKnown RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 HEY1Q9Y5J3 304 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.25□□□□□ -1.73
SNCA-213ENST00000618500 ITPR3Q14573 2671 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 CR1P17927 2039 aa4.25□□□□□ -1.73
SNCA-213ENST00000618500 hCG_1818297A0A087WSY0 165 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 A0A0A6YYC8 382 aaPredicted RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 A0A0J9YVX5 310 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 A0A1B0GTH6 734 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 TUBAL3A6NHL2 446 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 I3L1I5 382 aaPredicted RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 PHF1O43189 567 aaPredicted RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 HCRTR2O43614 444 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 KRT1P04264 644 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 FBXO45P0C2W1 286 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 SMIM10L1P0DMW3 83 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 ENDOUP21128 410 aaKnown RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 XCR1P46094 333 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 CLCN2P51788 898 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 PNLIPRP1P54315 467 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 OCRLQ01968 901 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 OC90Q02509 493 aaPredicted RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 TBCELQ5QJ74 424 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 NPNTQ6UXI9 565 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 VN1R4Q7Z5H5 301 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 ADGRE4PQ86SQ3 457 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 CIARTQ8N365 385 aaPredicted RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 LRRN4CLQ8ND94 238 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 MORN4Q8NDC4 146 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 ZPLD1Q8TCW7 415 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 SMIM10Q96HG1 83 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 BTBD6Q96KE9 485 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 MIPEPQ99797 713 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 YIPF4Q9BSR8 244 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 ZNF703Q9H7S9 590 aaPredicted RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 SYNPO2LQ9H987 977 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 ANKHQ9HCJ1 492 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 SACM1LQ9NTJ5 587 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 SMARCAL1Q9NZC9 954 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 NBASA2RRP1 2371 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 TACC2O95359 2948 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 HRNRQ86YZ3 2850 aaPredicted RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 SH3D21A4FU49 640 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 SERINC4A6NH21 518 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 AKR1B15C9JRZ8 316 aaPredicted RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 HS6ST1O60243 411 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 CDH16O75309 829 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 F10P00742 488 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 HPNP05981 417 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 PGRP06401 933 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 RHOXF2BP0C7M4 288 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 MC3RP41968 323 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 TTPAP49638 278 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 TAP2Q03519 686 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 ACTN3Q08043 901 aaPredicted RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 BIKQ13323 160 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 MPEG1Q2M385 716 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 PARP6Q2NL67 630 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 TYSND1Q2T9J0 566 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 DESI1Q6ICB0 168 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 LYPD8Q6UX82 237 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 CLEC17AQ6ZS10 378 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 PID1Q7Z2X4 250 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 VRK3Q8IV63 474 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 KLHDC8AQ8IYD2 350 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 RCOR2Q8IZ40 523 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 TMEM156Q8N614 296 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 TMEM251Q8N6I4 163 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 ANKK1Q8NFD2 765 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 OR4K1Q8NGD4 311 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 NEIL3Q8TAT5 605 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 P3H4Q92791 437 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 ZNF775Q96BV0 537 aaPredicted RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 TBC1D20Q96BZ9 403 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 HAUS1Q96CS2 278 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 CCL19Q99731 98 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 CEP41Q9BYV8 373 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 LRTM1Q9HBL6 345 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 DEPPQ9NTK1 212 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 CNIH4Q9P003 139 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 SPRR3Q9UBC9 169 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 PCYOX1Q9UHG3 505 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 ZNF223Q9UK11 482 aaPredicted RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 RNF112Q9ULX5 631 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 ATG4BQ9Y4P1 393 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 MYO7BQ6PIF6 2116 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 DIDO1Q9BTC0 2240 aaKnown RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 TRGV5A0A0B4J1U4 118 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 A8MUI8 341 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 HAT1O14929 419 aa4.24□□□□□ -1.73
SNCA-213ENST00000618500 GALR3O60755 368 aaPredicted RBP4.24□□□□□ -1.73
SNCA-213ENST00000618500 DNAJB6O75190 326 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms