RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 SLCO4C1Q6ZQN7 724 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 LRRC70Q7Z2Q7 622 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 LAPTM4BQ86VI4 370 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 OR11G2Q8NGC1 345 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 NT5CQ8TCD5 201 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 VPS50Q96JG6 964 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 RBCK1Q9BYM8 510 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 TGIF2Q9GZN2 237 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 MLXIPLQ9NP71 852 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 SCN3AQ9NY46 2000 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 PTBP2Q9UKA9 531 aaKnown RBP15.13■□□□□ 0.01
BRCA1-228ENST00000618469 VPS4AQ9UN37 437 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 ZNF451Q9Y4E5 1061 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 ASB1Q9Y576 335 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 SLC22A7Q9Y694 548 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 ITPR2Q14571 2701 aa15.13■□□□□ 0.01
BRCA1-228ENST00000618469 TTLL8A6PVC2 850 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 SYCE1LA8MT33 242 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 CLGNO14967 610 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 JRKO75564 520 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 KRT38O76015 456 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 ABHD2P08910 425 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 ALOX12P18054 663 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 CXCR2P25025 360 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 HNF4AP41235 474 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 MSH2P43246 934 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 EMP2P54851 167 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 SKP1P63208 163 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 AIMP2Q13155 320 aaKnown RBP15.12■□□□□ 0.01
BRCA1-228ENST00000618469 MYBPC3Q14896 1274 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 MINDY4Q4G0A6 757 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 DEFB134Q4QY38 66 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 TOR1AIP1Q5JTV8 583 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 VWA5B1Q5TIE3 1220 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 KLC3Q6P597 504 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 ABHD13Q7L211 337 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 SHISA5Q8N114 240 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 KRT78Q8N1N4 520 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 TRPV3Q8NET8 790 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 OR51Q1Q8NH59 317 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 SSC4DQ8WTU2 575 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 UBTD2Q8WUN7 234 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 CCT6BQ92526 530 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 CAPS2Q9BXY5 557 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 L2HGDHQ9H9P8 463 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 ATP13A2Q9NQ11 1180 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 MKL2Q9ULH7 1088 aa15.12■□□□□ 0.01
BRCA1-228ENST00000618469 RP1L1Q8IWN7 2480 aaPredicted RBP15.12■□□□□ 0.01
BRCA1-228ENST00000618469 SHANK1Q9Y566 2161 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 GALR3O60755 368 aaPredicted RBP15.11■□□□□ 0.01
BRCA1-228ENST00000618469 H2AFYO75367 372 aaKnown RBP15.11■□□□□ 0.01
BRCA1-228ENST00000618469 KLHL2O95198 593 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 BMP10O95393 424 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 B3GALT4O96024 378 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 FAM153BP0C7A2 387 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 COX6A1P12074 109 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 GFAPP14136 432 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 MAGEA12P43365 314 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 AGTR2P50052 363 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 EFNA3P52797 238 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 RAB8AP61006 207 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 OLR1P78380 273 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 FAM153CQ494X1 144 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 XKR6Q5GH73 641 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 TMIGD1Q6UXZ0 262 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 TRMT10CQ7L0Y3 403 aaKnown RBP15.11■□□□□ 0.01
BRCA1-228ENST00000618469 AFAP1L2Q8N4X5 818 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 EFCAB3Q8N7B9 438 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 OR5T3Q8NGG3 340 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 RHEBL1Q8TAI7 183 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 DCAKDQ8WVC6 231 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 ISL2Q96A47 359 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 SMAD5Q99717 465 aaKnown RBP15.11■□□□□ 0.01
BRCA1-228ENST00000618469 CD244Q9BZW8 370 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 SLC6A16Q9GZN6 736 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 EHD1Q9H4M9 534 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 ZNF160Q9HCG1 818 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 OPTCQ9UBM4 332 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 ZNF180Q9UJW8 692 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 PCDHGB7Q9Y5F8 929 aa15.11■□□□□ 0.01
BRCA1-228ENST00000618469 URADA6NGE7 173 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 TRIM49D1C9J1S8 452 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 C4orf51C9J302 202 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 RIPK2O43353 540 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 PRAMEF4O60810 478 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 CDC123O75794 336 aaPredicted RBP15.1■□□□□ 0.01
BRCA1-228ENST00000618469 HPP00738 406 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 ALPPP05187 535 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 C8orf89P0DMQ9 161 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 MTHFD2P13995 350 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 CNTFP26441 200 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 IRF8Q02556 426 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 HYAL2Q12891 473 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 DOC2AQ14183 400 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 ACAP2Q15057 778 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 TECRLQ5HYJ1 363 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 IRAK1BP1Q5VVH5 260 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 PRAMEF9Q5VWM5 478 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 PARP9Q8IXQ6 854 aa15.1■□□□□ 0.01
BRCA1-228ENST00000618469 TTLQ8NG68 377 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms