RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 C1orf226A1L170 272 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 LRRC72A6NJI9 287 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 DLGAP1O14490 977 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 EI24O14681 340 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 LCMT2O60294 686 aaKnown RBP16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 KCNK5O95279 499 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 PRSS53Q2L4Q9 553 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 MPEG1Q2M385 716 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 LPCAT2Q7L5N7 544 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 CHERPQ8IWX8 916 aaKnown RBP16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 ZZZ3Q8IYH5 903 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 OR10Q1Q8NGQ4 319 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 CCL4L1Q8NHW4 92 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 BDH2Q9BUT1 245 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 ZNF717Q9BY31 904 aaPredicted RBP16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 AASDHPPTQ9NRN7 309 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 RASAL1O95294 804 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 ZNF23P17027 643 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 C16orf72Q14CZ0 275 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 NHSL2Q5HYW2 709 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 CCNYL2Q5T2Q4 361 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 R3HCC1LQ7Z5L2 792 aaKnown RBP16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 PTOV1Q86YD1 416 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 NT5DC2Q9H857 520 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 CAAP1Q9H8G2 361 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 ATAD3AQ9NVI7 634 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 AHSPQ9NZD4 102 aa16.59■□□□□ 0.25
PCDHGC3-205ENST00000617641 UPK1AO00322 258 aa16.58■□□□□ 0.25
PCDHGC3-205ENST00000617641 DEAF1O75398 565 aaPredicted RBP16.58■□□□□ 0.25
PCDHGC3-205ENST00000617641 SEMA3DO95025 777 aa16.58■□□□□ 0.25
PCDHGC3-205ENST00000617641 C6orf47O95873 294 aa16.58■□□□□ 0.25
PCDHGC3-205ENST00000617641 NTRK1P04629 796 aa16.58■□□□□ 0.25
PCDHGC3-205ENST00000617641 HBA1P69905 142 aa16.58■□□□□ 0.25
PCDHGC3-205ENST00000617641 SMAD4Q13485 552 aaKnown RBP16.58■□□□□ 0.25
PCDHGC3-205ENST00000617641 TMEM214Q6NUQ4 689 aaKnown RBP16.58■□□□□ 0.25
PCDHGC3-205ENST00000617641 PGBD3Q8N328 593 aa16.58■□□□□ 0.25
PCDHGC3-205ENST00000617641 MFSD2AQ8NA29 543 aa16.58■□□□□ 0.25
PCDHGC3-205ENST00000617641 ZFP90Q8TF47 636 aa16.58■□□□□ 0.25
PCDHGC3-205ENST00000617641 PRO3102Q9H379 93 aa16.58■□□□□ 0.25
PCDHGC3-205ENST00000617641 SPHK1Q9NYA1 384 aa16.58■□□□□ 0.25
PCDHGC3-205ENST00000617641 VPS4AQ9UN37 437 aa16.58■□□□□ 0.25
PCDHGC3-205ENST00000617641 PLXND1Q9Y4D7 1925 aa16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 SEMA4FO95754 770 aa16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 GLULP15104 373 aa16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 HTR1BP28222 390 aa16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 PEBP1P30086 187 aaKnown RBP16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 BSGP35613 385 aa16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 MYBPC1Q00872 1141 aa16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 CCDC85BQ15834 202 aaPredicted RBP16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 ADRM1Q16186 407 aa16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 VMACQ2NL98 169 aa16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 CPZQ66K79 652 aa16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 SLC30A9Q6PML9 568 aa16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 TBPL2Q6SJ96 375 aa16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 GALNT10Q86SR1 603 aa16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 ADGRF3Q8IZF5 1079 aa16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 RNF217Q8TC41 542 aa16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 PITHD1Q9GZP4 211 aaPredicted RBP16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 TMEM168Q9H0V1 697 aa16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 SLC6A20Q9NP91 592 aa16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 PDP2Q9P2J9 529 aa16.58■□□□□ 0.24
PCDHGC3-205ENST00000617641 PLOD2O00469 737 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 APBB3O95704 486 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 STATHP02808 62 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 SERPIND1P05546 499 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 NUDT7P0C024 238 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 RPL3P39023 403 aaKnown RBP16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 TXNL4AP83876 142 aaKnown RBP16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 LRRC23Q53EV4 343 aaPredicted RBP16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 ZNF852Q6ZMS4 543 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 CARM1Q86X55 608 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 TMBIM1Q969X1 311 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 MRPS30Q9NP92 439 aaKnown RBP16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 LHX9Q9NQ69 397 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 OLAHQ9NV23 265 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 ZNF639Q9UID6 485 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 HEBP2Q9Y5Z4 205 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 TRIOO75962 3097 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 TRBV23OR9-2A0A075B6M9 112 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 MYOCOSA0A1B0GUC4 107 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 AXIN1O15169 862 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 NDUFS4O43181 175 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 PRICKLE3O43900 615 aaPredicted RBP16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 GPR37L1O60883 481 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 PRSS23O95084 383 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 RASGRP1O95267 797 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 SERPINB1P30740 379 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 AKT2P31751 481 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 ACTR1BP42025 376 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 MAPK12P53778 367 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 ACTR1AP61163 376 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 FAM180BQ6P0A1 224 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 IKBIPQ70UQ0 350 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 FBXL6Q8N531 539 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 C6orf106Q9H6K1 298 aaPredicted RBP16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 MIEF1Q9NQG6 463 aa16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 ZNF282Q9UDV7 671 aaPredicted RBP16.57■□□□□ 0.24
PCDHGC3-205ENST00000617641 CCNDBP1O95273 360 aa16.56■□□□□ 0.24
PCDHGC3-205ENST00000617641 CST1P01037 141 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms