RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 TGM5O43548 720 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 LEFTY1O75610 366 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 CXCL10P02778 98 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 STSP08842 583 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 DBTP11182 482 aaKnown RBP11.34□□□□□ -0.59
C11orf54-215ENST00000617482 IMPA1P29218 277 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 ASMTP46597 345 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 SPIBQ01892 262 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 FADDQ13158 208 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 SLC13A2Q13183 592 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 SOWAHCQ53LP3 525 aaPredicted RBP11.34□□□□□ -0.59
C11orf54-215ENST00000617482 ARSIQ5FYB1 569 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 IER5LQ5T953 404 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 RASGEF1AQ8N9B8 481 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 OR10G2Q8NGC3 310 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 STARD8Q92502 1023 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 GGHQ92820 318 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 HPS1Q92902 700 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 CIDECQ96AQ7 238 aaPredicted RBP11.34□□□□□ -0.59
C11orf54-215ENST00000617482 COQ8BQ96D53 544 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 TCF25Q9BQ70 676 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 CORO1BQ9BR76 489 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 C6orf62Q9GZU0 229 aaPredicted RBP11.34□□□□□ -0.59
C11orf54-215ENST00000617482 RNF167Q9H6Y7 350 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 ABCB10Q9NRK6 738 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 E9PQ18 207 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 MRPS14O60783 128 aaKnown RBP11.34□□□□□ -0.59
C11orf54-215ENST00000617482 C6orf47O95873 294 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 NAT2P11245 290 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 PCGF2P35227 344 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 GGT2P36268 569 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 RECQLP46063 649 aaPredicted RBP11.34□□□□□ -0.59
C11orf54-215ENST00000617482 CRISP3P54108 245 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 C21orf58P58505 322 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 RPS3AP61247 264 aaKnown RBP11.34□□□□□ -0.59
C11orf54-215ENST00000617482 ELP6Q0PNE2 266 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 COLEC12Q5KU26 742 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 TMC8Q8IU68 726 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 DNAJC22Q8N4W6 341 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 OR9Q2Q8NGE9 314 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 OR5AK3PQ8NH89 298 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 NFKBIDQ8NI38 313 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 CYB5D2Q8WUJ1 264 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 ATL1Q8WXF7 558 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 EPS8L2Q9H6S3 715 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 BRF2Q9HAW0 419 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 GIN1Q9NXP7 522 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 ZNF229Q9UJW7 825 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 SLC6A14Q9UN76 642 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 CORO2BQ9UQ03 480 aa11.34□□□□□ -0.59
C11orf54-215ENST00000617482 TRIM43BA6NCK2 446 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 PRAMEF25A6NGN4 478 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 CLCA1A8K7I4 914 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 KDM1AO60341 852 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 TGFB1P01137 390 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 LRG1P02750 347 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 CATP04040 527 aaKnown RBP11.33□□□□□ -0.6
C11orf54-215ENST00000617482 PPIBP23284 216 aaKnown RBP11.33□□□□□ -0.6
C11orf54-215ENST00000617482 TIA1P31483 386 aaKnown RBP eCLIP11.33□□□□□ -0.6
C11orf54-215ENST00000617482 VIPR1P32241 457 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 PRIM2P49643 509 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 TMED10P49755 219 aaKnown RBP11.33□□□□□ -0.6
C11orf54-215ENST00000617482 PPP5CP53041 499 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 MVDP53602 400 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 CSNK2BP67870 215 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 ZNF33BQ06732 778 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 EXOC3L2Q2M3D2 409 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 FAM180BQ6P0A1 224 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 NCCRP1Q6ZVX7 275 aaPredicted RBP11.33□□□□□ -0.6
C11orf54-215ENST00000617482 RASGRP3Q8IV61 690 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 MYDGFQ969H8 173 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 SLC35A5Q9BS91 424 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 SPATA9Q9BWV2 254 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 SPG21Q9NZD8 308 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 SPASTQ9UBP0 616 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 ZNF282Q9UDV7 671 aaPredicted RBP11.33□□□□□ -0.6
C11orf54-215ENST00000617482 MAP4K5Q9Y4K4 846 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 RNASET2O00584 256 aaKnown RBP11.33□□□□□ -0.6
C11orf54-215ENST00000617482 NPC1O15118 1278 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 ADAMDEC1O15204 470 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 AQP9O43315 295 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 DPM1O60762 260 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 AP2A2O94973 939 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 CDK1P06493 297 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 HSMCR30P0CW71 290 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 CTSAP10619 480 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 PABPC1P11940 636 aaKnown RBP11.33□□□□□ -0.6
C11orf54-215ENST00000617482 ZNF8P17098 575 aaPredicted RBP11.33□□□□□ -0.6
C11orf54-215ENST00000617482 CD40LGP29965 261 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 WEE1P30291 646 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 GRK5P34947 590 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 CTSKP43235 329 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 SEPHS1P49903 392 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 DGKEP52429 567 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 MEF2AQ02078 507 aaPredicted RBP11.33□□□□□ -0.6
C11orf54-215ENST00000617482 SCARB2Q14108 478 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 TEAD4Q15561 434 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 ZNF404Q494X3 552 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 SPIN4Q56A73 249 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 HENMT1Q5T8I9 393 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms