RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 RABGGTBP53611 331 aa13.11□□□□□ -0.31
PPP4R3B-205ENST00000616288 ABHD18Q0P651 414 aa13.11□□□□□ -0.31
PPP4R3B-205ENST00000616288 SF3A2Q15428 464 aaKnown RBP13.11□□□□□ -0.31
PPP4R3B-205ENST00000616288 FAM98CQ17RN3 349 aaKnown RBP13.11□□□□□ -0.31
PPP4R3B-205ENST00000616288 SLC35F1Q5T1Q4 408 aa13.11□□□□□ -0.31
PPP4R3B-205ENST00000616288 SIAH1Q8IUQ4 282 aa13.11□□□□□ -0.31
PPP4R3B-205ENST00000616288 CCDC117Q8IWD4 279 aaPredicted RBP13.11□□□□□ -0.31
PPP4R3B-205ENST00000616288 HASPINQ8TF76 798 aa13.11□□□□□ -0.31
PPP4R3B-205ENST00000616288 NUDT8Q8WV74 236 aa13.11□□□□□ -0.31
PPP4R3B-205ENST00000616288 TCEAL4Q96EI5 215 aa13.11□□□□□ -0.31
PPP4R3B-205ENST00000616288 MAGEB17A8MXT2 336 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 FXYD1O00168 92 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 PCDH17O14917 1159 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 VIPR1P32241 457 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 SCNN1GP51170 649 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 GPR17Q13304 367 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 PTPRCAPQ14761 206 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 PRSS36Q5K4E3 855 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 SAXO2Q658L1 398 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 C11orf65Q8NCR3 313 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 GPR156Q8NFN8 814 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 NR4A3Q92570 626 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 RPRD1AQ96P16 312 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 DPH2Q9BQC3 489 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 RSPH9Q9H1X1 276 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 GLYATL1P3A0A0U1RQE8 302 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 MMP20O60882 483 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 TFP02787 698 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 HMGN1P05114 100 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 ITGAMP11215 1152 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 PRDX3P30048 256 aaKnown RBP13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 MAGEA3P43357 314 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 MTFR2Q6P444 385 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 CEP68Q76N32 757 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 LINC00518Q8N0U6 118 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 TMEM130Q8N3G9 435 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 KAT2AQ92830 837 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 LRRC46Q96FV0 321 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 FCRL4Q96PJ5 515 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 SSX3Q99909 188 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 TREX2Q9BQ50 279 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 ZNF334Q9HCZ1 680 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 ARL15Q9NXU5 204 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 TRPC4Q9UBN4 977 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 CRLS1Q9UJA2 301 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 GPR45Q9Y5Y3 372 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 MN1Q10571 1320 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 FER1L4A9Z1Z3 1794 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 RPS6KA4O75676 772 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 HLA-DMAP28067 261 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 S100A2P29034 98 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 NDUFV1P49821 464 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 TAF6P49848 677 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 GTF2H2Q13888 395 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 IFI44LQ53G44 452 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 FBXO47Q5MNV8 452 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 GTF2H2CQ6P1K8 395 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 TMEM192Q8IY95 271 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 TCTE3Q8IZS6 198 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 SLC5A8Q8N695 610 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 GTF3C2Q8WUA4 911 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 ZNF471Q9BX82 626 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 TPT1P8Q9HAU6 139 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 C14orf105Q9NVL8 296 aa13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 NDRG2Q9UN36 371 aaKnown RBP13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 ZFR2Q9UPR6 939 aaKnown RBP13.1□□□□□ -0.31
PPP4R3B-205ENST00000616288 E9PI62 339 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 SLC16A6O15403 523 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 SERPINA3P01011 423 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 ESR1P03372 595 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 SYN1P17600 705 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 TNFRSF1BP20333 461 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 EPHA2P29317 976 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 INCA1Q0VD86 236 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 ZNF484Q5JVG2 852 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 RGMBQ6NW40 437 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 XRRA1Q6P2D8 792 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 TMC8Q8IU68 726 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 C2CD4AQ8NCU7 369 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 CPNE2Q96FN4 548 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 PKP4Q99569 1192 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 PKMYT1Q99640 499 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 SEMA3CQ99985 751 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 POLR2J3Q9H1A7 115 aaKnown RBP13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 CTPS2Q9NRF8 586 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 IGSF5Q9NSI5 407 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 FABP1P07148 127 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 B2MP61769 119 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 BLOC1S1P78537 153 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 SP2Q02086 613 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 SNTB2Q13425 540 aaKnown RBP13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 HEPACAMQ14CZ8 416 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 ZNF433Q8N7K0 673 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 WDSUB1Q8N9V3 476 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 SMARCD1Q96GM5 515 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 DPYSL5Q9BPU6 564 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 IER2Q9BTL4 223 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 FAM126AQ9BYI3 521 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 SAP130Q9H0E3 1048 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.09□□□□□ -0.315e-9■■■■■ 31.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms