RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 ABCG8Q9H221 673 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 CHRDQ9H2X0 955 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 ZFYVE1Q9HBF4 777 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 CHMP1AQ9HD42 196 aaPredicted RBP8.5□□□□□ -1.05
VPS11-206ENST00000614944 EVA1BQ9NVM1 165 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 SLC2A6Q9UGQ3 507 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 SLCO3A1Q9UIG8 710 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 ACSL5Q9ULC5 683 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 POMPQ9Y244 141 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 PKP3Q9Y446 797 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 HSPE1-MOB4S4R3N1 261 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 MYOFQ9NZM1 2061 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 KRT87PA6NCN2 255 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 CCNB2O95067 398 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 ADH1BP00325 375 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 AHSGP02765 367 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 FCER2P06734 321 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 NOS3P29474 1203 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 ZNF91Q05481 1191 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 ALKBH1Q13686 389 aaKnown RBP8.5□□□□□ -1.05
VPS11-206ENST00000614944 FAM46CQ5VWP2 391 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 TTC33Q6PID6 262 aaPredicted RBP8.5□□□□□ -1.05
VPS11-206ENST00000614944 XKRXQ6PP77 449 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 PLCZ1Q86YW0 608 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 TIGD4Q8IY51 512 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 SYNPOQ8N3V7 929 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 BLOC1S5Q8TDH9 187 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 FBXL21Q9UKT6 434 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 PCDHGB1Q9Y5G3 927 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 ARL5AQ9Y689 179 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 CHD9Q3L8U1 2897 aa8.5□□□□□ -1.05
VPS11-206ENST00000614944 TTC24A2A3L6 582 aaPredicted RBP8.49□□□□□ -1.05
VPS11-206ENST00000614944 C1QTNF3-AMACRE9PGA6 284 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 LOC110117498-PIK3R3F6TDL0 507 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 GAPDHSO14556 408 aaPredicted RBP8.49□□□□□ -1.05
VPS11-206ENST00000614944 SCAMP3O14828 347 aaKnown RBP8.49□□□□□ -1.05
VPS11-206ENST00000614944 FDXRP22570 491 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 S100PP25815 95 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 SPAM1P38567 509 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 PTGER3P43115 390 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 GBX2P52951 348 aaPredicted RBP8.49□□□□□ -1.05
VPS11-206ENST00000614944 PEX6Q13608 980 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 Q6ZVU0 165 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 CREB3L2Q70SY1 520 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 ZNF786Q8N393 782 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 SETD7Q8WTS6 366 aaKnown RBP8.49□□□□□ -1.05
VPS11-206ENST00000614944 HDAC10Q969S8 669 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.49□□□□□ -1.05
VPS11-206ENST00000614944 DACH2Q96NX9 599 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 FAM129BQ96TA1 746 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 P2RY12Q9H244 342 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 TNKS2Q9H2K2 1166 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 ABCB10Q9NRK6 738 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 ATXN7L1Q9ULK2 861 aaPredicted RBP8.49□□□□□ -1.05
VPS11-206ENST00000614944 AUP1Q9Y679 476 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 TRANK1O15050 2925 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 A0A1W2PPM1 405 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 C2CD4DB7Z1M9 353 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 K7EQS6 105 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 SOX1O00570 391 aaPredicted RBP8.49□□□□□ -1.05
VPS11-206ENST00000614944 STX7O15400 261 aaKnown RBP8.49□□□□□ -1.05
VPS11-206ENST00000614944 CAPN5O15484 640 aaPredicted RBP8.49□□□□□ -1.05
VPS11-206ENST00000614944 H2AFYO75367 372 aaKnown RBP8.49□□□□□ -1.05
VPS11-206ENST00000614944 CTSLP07711 333 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 TNNI3P19429 210 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 EEF1B2P24534 225 aaKnown RBP8.49□□□□□ -1.05
VPS11-206ENST00000614944 CD40LGP29965 261 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 MMP12P39900 470 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 UBE2IP63279 158 aaKnown RBP8.49□□□□□ -1.05
VPS11-206ENST00000614944 MTM1Q13496 603 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 LIN54Q6MZP7 749 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 BHLHB9Q6PI77 547 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 SLC9B2Q86UD5 537 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 GPAT4Q86UL3 456 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 MFSD4AQ8N468 514 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 CAMKK1Q8N5S9 505 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 OR2T34Q8NGX1 318 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 PSMA8Q8TAA3 256 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 ZFAND1Q8TCF1 268 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 TSPEARQ8WU66 669 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 DEDD2Q8WXF8 326 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 AGAP2Q99490 1192 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 C1QTNF1Q9BXJ1 281 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 TM6SF2Q9BZW4 377 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 GLS2Q9UI32 602 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 TMPRSS11EQ9UL52 423 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 DMRT1Q9Y5R6 373 aa8.49□□□□□ -1.05
VPS11-206ENST00000614944 MN1Q10571 1320 aaPredicted RBP8.49□□□□□ -1.05
VPS11-206ENST00000614944 TRBV23-1A0A0A0MS06 115 aa8.48□□□□□ -1.05
VPS11-206ENST00000614944 SAGE2PA6NJ88 616 aa8.48□□□□□ -1.05
VPS11-206ENST00000614944 ESR1P03372 595 aa8.48□□□□□ -1.05
VPS11-206ENST00000614944 ANXA6P08133 673 aa8.48□□□□□ -1.05
VPS11-206ENST00000614944 CTHP32929 405 aa8.48□□□□□ -1.05
VPS11-206ENST00000614944 PPP5CP53041 499 aa8.48□□□□□ -1.05
VPS11-206ENST00000614944 RAB10P61026 200 aa8.48□□□□□ -1.05
VPS11-206ENST00000614944 DPTQ07507 201 aa8.48□□□□□ -1.05
VPS11-206ENST00000614944 FNDC3BQ53EP0 1204 aaKnown RBP8.48□□□□□ -1.05
VPS11-206ENST00000614944 FASTKD1Q53R41 847 aaKnown RBP8.48□□□□□ -1.05
VPS11-206ENST00000614944 ZFP1Q6P2D0 407 aa8.48□□□□□ -1.05
VPS11-206ENST00000614944 LRFN4Q6PJG9 635 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms