RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 CSNK1G2P78368 415 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 IRX1P78414 480 aaPredicted RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 PRDX1Q06830 199 aaKnown RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 ZNF763Q0D2J5 394 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 HSPB3Q12988 150 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 NFATC4Q14934 902 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 DUOXA1Q1HG43 343 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 MPEG1Q2M385 716 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 COQ5Q5HYK3 327 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 DEPDC1Q5TB30 811 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 LCN8Q6JVE9 175 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 LCTLQ6UWM7 567 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 FKBP9P1Q75LS8 142 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 AMIGO1Q86WK6 493 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 NAGSQ8N159 534 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 SIX5Q8N196 739 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 SLC22A18ASQ8N1D0 253 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 KCT2Q8NC54 265 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 FBXO15Q8NCQ5 510 aaPredicted RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 ZNF548Q8NEK5 533 aaPredicted RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 FAM46DQ8NEK8 389 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 TRPV3Q8NET8 790 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 OR8K5Q8NH50 307 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 ZCCHC10Q8TBK6 192 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 SETD7Q8WTS6 366 aaKnown RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 NELL1Q92832 810 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 HLA-CQ95604 372 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 PPCDCQ96CD2 204 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 REPS1Q96D71 796 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 SLC6A18Q96N87 628 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 HAUS8Q9BT25 410 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 TRIM15Q9C019 465 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 SLC6A16Q9GZN6 736 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 KCNH6Q9H252 994 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 SRMSQ9H3Y6 488 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 KAT8Q9H7Z6 458 aaKnown RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 TPT1P8Q9HAU6 139 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 POLMQ9NP87 494 aaPredicted RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 STARD5Q9NSY2 213 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 UBAP1Q9NZ09 502 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 FZD4Q9ULV1 537 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 TMED5Q9Y3A6 229 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 HEATR5BQ9P2D3 2071 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 SNRNP200O75643 2136 aaKnown RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 CACNA1IQ9P0X4 2223 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 A0A096LPI6 279 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 TCRBV5S2A0A599 114 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 DYTNA2CJ06 578 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 DPPA5A6NC42 116 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 OR6C74A6NCV1 312 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 ZNF860A6NHJ4 632 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 MYO1GB0I1T2 1018 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 B4DGG1 531 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 C4orf51C9J302 202 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 EI24O14681 340 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 ERI3O43414 337 aaKnown RBP3.28□□□□□ -1.88
LIG4-205ENST00000614526 ERN1O75460 977 aaKnown RBP3.28□□□□□ -1.88
LIG4-205ENST00000614526 CREG1O75629 220 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 PGM3O95394 542 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 GNAO1P09471 354 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 SRFP11831 508 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 ATP6V1B1P15313 513 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 ZNF26P17031 533 aaPredicted RBP3.28□□□□□ -1.88
LIG4-205ENST00000614526 GGT1P19440 569 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 PTX3P26022 381 aaPredicted RBP3.28□□□□□ -1.88
LIG4-205ENST00000614526 PTPN6P29350 595 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 AKT2P31751 481 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 HPCAL1P37235 193 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 BCL6P41182 706 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 SSR2P43308 183 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 OLR1P78380 273 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 SRSF11Q05519 484 aaKnown RBP3.28□□□□□ -1.88
LIG4-205ENST00000614526 CHRNB3Q05901 458 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 FOXM1Q08050 763 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 VAC14Q08AM6 782 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 SMAD4Q13485 552 aaKnown RBP3.28□□□□□ -1.88
LIG4-205ENST00000614526 GPR18Q14330 331 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 PDK3Q15120 406 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 AASDHQ4L235 1098 aaPredicted RBP3.28□□□□□ -1.88
LIG4-205ENST00000614526 SPIN4Q56A73 249 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 KHDRBS2Q5VWX1 349 aaKnown RBP3.28□□□□□ -1.88
LIG4-205ENST00000614526 TNFAIP8L2Q6P589 184 aaPredicted RBP3.28□□□□□ -1.88
LIG4-205ENST00000614526 TSSK4Q6SA08 328 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 USP30Q70CQ3 517 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 ERMP1Q7Z2K6 904 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 SLC9B2Q86UD5 537 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 STK32CQ86UX6 486 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 EPHX4Q8IUS5 362 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 ZC3H7AQ8IWR0 971 aaKnown RBP3.28□□□□□ -1.88
LIG4-205ENST00000614526 LAS2Q8IYD9 372 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 MICU2Q8IYU8 434 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 ADGRF3Q8IZF5 1079 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 OFCC1Q8IZS5 231 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 RAB42Q8N4Z0 105 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 VPS37AQ8NEZ2 397 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 CYGBQ8WWM9 190 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 RAB8BQ92930 207 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 ZUFSPQ96AP4 578 aa3.28□□□□□ -1.88
LIG4-205ENST00000614526 PRPF18Q99633 342 aaKnown RBP3.28□□□□□ -1.88
LIG4-205ENST00000614526 CPPED1Q9BRF8 314 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms