RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 TMEM9Q9P0T7 183 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 POLR3HQ9Y535 204 aaPredicted RBP13.14□□□□□ -0.31
TMEM254-213ENST00000613758 MN1Q10571 1320 aaPredicted RBP13.14□□□□□ -0.31
TMEM254-213ENST00000613758 LOC105369274A0A096LPK9 316 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 LOC102723532A0A0G2JNH3 316 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 A0A1W2PQM1 296 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 AIM2O14862 343 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 NDUFS4O43181 175 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 ACADVLP49748 655 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 FRMPD2BQ6IN97 320 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 NOXRED1Q6NXP6 359 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 ASPGQ86U10 573 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 OR4N4Q8N0Y3 316 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 CARFQ8N187 725 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 DNAJC22Q8N4W6 341 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 SDR39U1Q9NRG7 319 aaPredicted RBP13.14□□□□□ -0.31
TMEM254-213ENST00000613758 ASIC5Q9NY37 505 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 ATXN7L1Q9ULK2 861 aaPredicted RBP13.14□□□□□ -0.31
TMEM254-213ENST00000613758 RUVBL1Q9Y265 456 aaKnown RBP13.14□□□□□ -0.31
TMEM254-213ENST00000613758 LRIT2A6NDA9 550 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 H0YGG7 62 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 FBP2O00757 339 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 SH3BP5O60239 455 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 MYO1DO94832 1006 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 ZBTB11O95625 1053 aaPredicted RBP13.13□□□□□ -0.31
TMEM254-213ENST00000613758 G6PDP11413 515 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 BCKDHAP12694 445 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 MAPK1P28482 360 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 HNRNPH1P31943 449 aaKnown RBP13.13□□□□□ -0.31
TMEM254-213ENST00000613758 NME5P56597 212 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 ARF3P61204 181 aaPredicted RBP13.13□□□□□ -0.31
TMEM254-213ENST00000613758 IRX1P78414 480 aaPredicted RBP13.13□□□□□ -0.31
TMEM254-213ENST00000613758 HYAL2Q12891 473 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 TMEM35AQ53FP2 167 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 ZC3H12BQ5HYM0 836 aaKnown RBP13.13□□□□□ -0.31
TMEM254-213ENST00000613758 SNAP47Q5SQN1 464 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 TMEM71Q6P5X7 295 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 PGM2L1Q6PCE3 622 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 CYP20A1Q6UW02 462 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 SCUBE1Q8IWY4 988 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 ULK2Q8IYT8 1036 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 DEFB107AQ8IZN7 70 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 DSELQ8IZU8 1212 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 MIER2Q8N344 545 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 METTL4Q8N3J2 472 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 LIX1Q8N485 282 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 RERGQ96A58 199 aaPredicted RBP13.13□□□□□ -0.31
TMEM254-213ENST00000613758 TM4SF19Q96DZ7 209 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 C11orf24Q96F05 449 aaPredicted RBP13.13□□□□□ -0.31
TMEM254-213ENST00000613758 SLC45A3Q96JT2 553 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 FCRL1Q96LA6 429 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 NPAS2Q99743 824 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 CENPKQ9BS16 269 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 KLHL31Q9H511 634 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 SOHLH2Q9NX45 425 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 AHSPQ9NZD4 102 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 FTSJ1Q9UET6 329 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 DLGAP4Q9Y2H0 992 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 ASXL3Q9C0F0 2248 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 LAMA1P25391 3075 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 RP1P56715 2156 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 C4orf47A7E2U8 309 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 MAP3K7O43318 606 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 CPNE6O95741 557 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 SNRPB2P08579 225 aaKnown RBP13.13□□□□□ -0.31
TMEM254-213ENST00000613758 TGM1P22735 817 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 ZFP36L2P47974 494 aaKnown RBP13.13□□□□□ -0.31
TMEM254-213ENST00000613758 NUDT2P50583 147 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 RAE1P78406 368 aaKnown RBP13.13□□□□□ -0.31
TMEM254-213ENST00000613758 PWP1Q13610 501 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 AASDHQ4L235 1098 aaPredicted RBP13.13□□□□□ -0.31
TMEM254-213ENST00000613758 TOR1AIP1Q5JTV8 583 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 COMMD6Q7Z4G1 85 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 MCATQ8IVS2 390 aaKnown RBP13.13□□□□□ -0.31
TMEM254-213ENST00000613758 ARHGAP24Q8N264 748 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 WDR48Q8TAF3 677 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 NT5CQ8TCD5 201 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 WDR60Q8WVS4 1066 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 RGMAQ96B86 450 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 EBPLQ9BY08 206 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 BRINP2Q9C0B6 783 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 REXO4Q9GZR2 422 aaKnown RBP13.13□□□□□ -0.31
TMEM254-213ENST00000613758 AICDAQ9GZX7 198 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 SYNDIG1Q9H7V2 258 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 PDE7BQ9NP56 450 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 SIRT5Q9NXA8 310 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 SEMA5BQ9P283 1151 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 SLC7A8Q9UHI5 535 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 BAIAP2L1Q9UHR4 511 aa13.13□□□□□ -0.31
TMEM254-213ENST00000613758 A8MU76 341 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 PLPP1O14494 284 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 HCRTR1O43613 425 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 SEMA3DO95025 777 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 EIF2S1P05198 315 aaKnown RBP13.12□□□□□ -0.31
TMEM254-213ENST00000613758 SLC35G6P0C7Q6 338 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 PRPS2P11908 318 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 ACPPP15309 386 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 ACP1P24666 158 aa13.12□□□□□ -0.31
TMEM254-213ENST00000613758 MLLT3P42568 568 aaPredicted RBP13.12□□□□□ -0.31
TMEM254-213ENST00000613758 SEPHS1P49903 392 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms