RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 GLP1RP43220 463 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 MAD2L1BPQ15013 274 aaPredicted RBP16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 ZNF678Q5SXM1 525 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 OGFRL1Q5TC84 451 aaPredicted RBP16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 LIPJQ5W064 366 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 CCDC28AQ8IWP9 274 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 PHC2Q8IXK0 858 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 CMTR2Q8IYT2 770 aaKnown RBP16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 DENND6BQ8NEG7 585 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 SCP2D1Q9UJQ7 156 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 RP2O75695 350 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 IL3P08700 152 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 MPC1LP0DKB6 136 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 PCLAFQ15004 111 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 OR9A1PQ8NGU1 263 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 IL4I1Q96RQ9 567 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 KCNH6Q9H252 994 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 PNO1Q9NRX1 252 aaKnown RBP16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 J3QRK9 145 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 UFM1P61960 85 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 ATP6AP1Q15904 470 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 BTBD16Q32M84 506 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 ANKDD1AQ495B1 522 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 SFT2D3Q587I9 215 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 CLEC12AQ5QGZ9 265 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 LRIF1Q5T3J3 769 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 AGTRAPQ6RW13 159 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 FBXL8Q96CD0 374 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 ISOC1Q96CN7 298 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 SLC25A36Q96CQ1 311 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 TAC3Q9UHF0 121 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 PLEKHA6Q9Y2H5 1048 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 PIGBOS1A0A0B4J2F0 54 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 M0R2N6 131 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 SAP18O00422 153 aaKnown RBP16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 CA12O43570 354 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 POP7O75817 140 aaKnown RBP16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 GP1BBP13224 206 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 S100A10P60903 97 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 ZNF763Q0D2J5 394 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 GFOD2Q3B7J2 385 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 GRHL2Q6ISB3 625 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 TSTD1Q8NFU3 115 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 GRHL3Q8TE85 626 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 PKP4Q99569 1192 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 ABCD2Q9UBJ2 740 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 AHSA1O95433 338 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 S100A12P80511 92 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 CYBRD1Q53TN4 286 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 OTOP2Q7RTS6 562 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 ZNF550Q7Z398 422 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 SLC9B2Q86UD5 537 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 KCNN1Q92952 543 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 MS4A12Q9NXJ0 267 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 ZNF541Q9H0D2 1346 aa16.86■□□□□ 0.29
HMGXB3-206ENST00000613459 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 GSTM4Q03013 218 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 GRIK2Q13002 908 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 PLEKHN1Q494U1 663 aaPredicted RBP16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 OTUB2Q96DC9 234 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 BARD1Q99728 777 aaKnown RBP16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 STYXL1Q9Y6J8 313 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 HOXD8P13378 290 aaPredicted RBP16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 PTGR1Q14914 329 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 GRK1Q15835 563 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 ALKBH2Q6NS38 261 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 C22orf39Q6P5X5 142 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 TLDC1Q6P9B6 456 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 ZC3H3Q8IXZ2 948 aaKnown RBP16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 TFGQ92734 400 aaPredicted RBP16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 GAL3ST1Q99999 423 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 UBQLN2Q9UHD9 624 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 SH3PXD2BA1X283 911 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 ZNF878C9JN71 531 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 ARVCFO00192 962 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 INHAP05111 366 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 GNAO1P09471 354 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 PET100P0DJ07 73 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 UGT2B10P36537 528 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 TGFBIQ15582 683 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 CDKL4Q5MAI5 379 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 ZNF101Q8IZC7 436 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 SLC45A3Q96JT2 553 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 AMBNQ9NP70 447 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 A0A096LPI6 279 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 LRRN3E7EW58 273 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 CDC7O00311 574 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 ADH1BP00325 375 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 ALPIP09923 528 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 HAPLN1P10915 354 aaPredicted RBP16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 G6PDP11413 515 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 RPL17P18621 184 aaKnown RBP16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 MATN1P21941 496 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 CLCNKAP51800 687 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 DGKQP52824 942 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 GPR17Q13304 367 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 USF2Q15853 346 aaPredicted RBP16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 SGCBQ16585 318 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 TMEM164Q5U3C3 297 aa16.85■□□□□ 0.29
HMGXB3-206ENST00000613459 ZSWIM9Q86XI8 627 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms