RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 LRRC52Q8N7C0 313 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 RAB39BQ96DA2 213 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 P2RY11Q96G91 374 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 CNOT2Q9NZN8 540 aaKnown RBP8.51□□□□□ -1.05
TTC28-208ENST00000612946 OR6C65A6NJZ3 312 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 NEDD8-MDP1E9PL57 170 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 LATO43561 262 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 SULT1C4O75897 302 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 SLC22A5O76082 557 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 BEST1O76090 585 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 UPP2O95045 317 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 IL7RP16871 459 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 IDH3GP51553 393 aaPredicted RBP8.51□□□□□ -1.05
TTC28-208ENST00000612946 IRF2BP1Q8IU81 584 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 AUTS2Q8WXX7 1259 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 IL4I1Q96RQ9 567 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 POLHQ9Y253 713 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 C3P01024 1663 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 CD163L1Q9NR16 1453 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 TMEM221A6NGB7 291 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 A8MV72 311 aaPredicted RBP8.51□□□□□ -1.05
TTC28-208ENST00000612946 LRATO95237 230 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 BMXP51813 675 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 GALNT1Q10472 559 aaPredicted RBP8.51□□□□□ -1.05
TTC28-208ENST00000612946 DSC3Q14574 896 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 CRY2Q49AN0 593 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 GLT8D1Q68CQ7 371 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 AADACL2Q6P093 401 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 DEFB106AQ8N104 65 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 AQP11Q8NBQ7 271 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 NDNFQ8TB73 568 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 ELMOD3Q96FG2 381 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 CCDC120Q96HB5 630 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 CELF6Q96J87 481 aaKnown RBP8.51□□□□□ -1.05
TTC28-208ENST00000612946 COPS8Q99627 209 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 DUSP26Q9BV47 211 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 TEX264Q9Y6I9 313 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 SDC3O75056 442 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 TUBG1P23258 451 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 CCND3P30281 292 aaPredicted RBP8.51□□□□□ -1.05
TTC28-208ENST00000612946 AWAT2Q6E213 333 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 REEP3Q6NUK4 255 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 TMED4Q7Z7H5 227 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 TTLL6Q8N841 843 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 TMEM185AQ8NFB2 350 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 NEK7Q8TDX7 302 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 APOLD1Q96LR9 279 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 CYB5R1Q9UHQ9 305 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 ZNF318Q5VUA4 2279 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 GTPBP1O00178 669 aaKnown RBP8.51□□□□□ -1.05
TTC28-208ENST00000612946 CBSLP0DN79 551 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 RPL10P27635 214 aaKnown RBP8.51□□□□□ -1.05
TTC28-208ENST00000612946 CBSP35520 551 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 LRP8Q14114 963 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 TMEM31Q5JXX7 168 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 OTOP1Q7RTM1 612 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 OR4F6Q8NGB9 312 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 OR56A1Q8NGH5 318 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 RHOXF1Q8NHV9 184 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 STK35Q8TDR2 534 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 CXorf40BQ96DE9 158 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 PRRT1Q99946 306 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 TSSK6Q9BXA6 273 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 RBCK1Q9BYM8 510 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 IPPKQ9H8X2 491 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 SACM1LQ9NTJ5 587 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 EIF2B4Q9UI10 523 aaKnown RBP8.51□□□□□ -1.05
TTC28-208ENST00000612946 SMLR1H3BR10 107 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 OR10H2O60403 315 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 CASP3P42574 277 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 WNT3AP56704 352 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 TBCEQ15813 527 aaPredicted RBP8.51□□□□□ -1.05
TTC28-208ENST00000612946 SLC2A14Q8TDB8 520 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 LHPPQ9H008 270 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 MOCS1Q9NZB8 636 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 DPP7Q9UHL4 492 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 BCAS1O75363 584 aaPredicted RBP8.51□□□□□ -1.05
TTC28-208ENST00000612946 NR0B1P51843 470 aaKnown RBP8.51□□□□□ -1.05
TTC28-208ENST00000612946 CRYZQ08257 329 aaKnown RBP8.51□□□□□ -1.05
TTC28-208ENST00000612946 MUS81Q96NY9 551 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 TRIB3Q96RU7 358 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 NELL2Q99435 816 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 CD180Q99467 661 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 PIP5K1AQ99755 562 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 GNRH1P01148 92 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 CSF2P04141 144 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 ALPPP05187 535 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 ADRB1P08588 477 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 ANXA4P09525 319 aaPredicted RBP8.51□□□□□ -1.05
TTC28-208ENST00000612946 CA5AP35218 305 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 MTPNP58546 118 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 CD81P60033 236 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 ELOAQ14241 798 aaKnown RBP8.51□□□□□ -1.05
TTC28-208ENST00000612946 CPSF6Q16630 551 aaKnown RBP eCLIP8.51□□□□□ -1.05
TTC28-208ENST00000612946 DCST2Q5T1A1 773 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 ARL9Q6T311 187 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 PAPD5Q8NDF8 572 aaKnown RBP8.51□□□□□ -1.05
TTC28-208ENST00000612946 OR4C15Q8NGM1 316 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 UROC1Q96N76 676 aa8.51□□□□□ -1.05
TTC28-208ENST00000612946 ASB8Q9H765 288 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms