RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 ITGALP20701 1170 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 IVDP26440 423 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PDHA2P29803 388 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 SHMT2P34897 504 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PPARGP37231 505 aaPredicted RBP6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 GRIA3P42263 894 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 MAGEA3P43357 314 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 CD151P48509 253 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 VPS41P49754 854 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 OC90Q02509 493 aaPredicted RBP6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 CAV1Q03135 178 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ACVR1Q04771 509 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 CALCOCO2Q13137 446 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 POU6F1Q14863 301 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 GPR33Q49SQ1 333 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 DNAJC21Q5F1R6 531 aaKnown RBP6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 TCTE1Q5JU00 501 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 TSTD2Q5T7W7 516 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 SNX20Q7Z614 316 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PDIK1LQ8N165 341 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 MMGT1Q8N4V1 131 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 HORMAD2Q8N7B1 307 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 TTC29Q8NA56 475 aaPredicted RBP6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 RELL2Q8NC24 303 aaPredicted RBP6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 OR4K2Q8NGD2 314 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ZNF398Q8TD17 642 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 TFGQ92734 400 aaPredicted RBP6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 RNASE6Q93091 150 aaKnown RBP6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PIGTQ969N2 578 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ULK4Q96C45 1275 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 LRRC39Q96DD0 335 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 SERPINB12Q96P63 405 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 TTC1Q99614 292 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ERP44Q9BS26 406 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 NAT9Q9BTE0 207 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 KIFC1Q9BW19 673 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PHACTR1Q9C0D0 580 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 TRIM45Q9H8W5 580 aaPredicted RBP6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 COG4Q9H9E3 785 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 KCNK13Q9HB14 408 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 OR6C2Q9NZP2 312 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 SAMD15Q9P1V8 674 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 WHRNQ9P202 907 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 STOX2Q9P2F5 926 aaPredicted RBP6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 TCAF1Q9Y4C2 921 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ARHGAP21Q5T5U3 1957 aa6.73□□□□□ -1.33
PTCHD3P1-201ENST00000612350 DSCAMO60469 2012 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 DYSFO75923 2080 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 A0A087X1B8 175 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 IGHV3-20A0A0C4DH32 117 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 TCRBV7S3A2A0A539 114 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 TUBAL3A6NHL2 446 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ESPNB1AK53 854 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ISM1B1AKI9 464 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 NPIPA2E9PIF3 369 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 F8W8V4 182 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 NPIPA3F8WFD2 350 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PFDN6O15212 129 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 RAD51CO43502 376 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 SEC24DO94855 1032 aaPredicted RBP6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 TTC4O95801 387 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 FAM157CP0CG43 387 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 RALBP11234 206 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PAMP19021 973 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 MSH3P20585 1137 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 RFC3P40938 356 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 GRIA1P42261 906 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 SESN2P58004 480 aaPredicted RBP6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PRAMEP78395 509 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 XIAPP98170 497 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 RELBQ01201 579 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 C2orf54Q08AI8 447 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 POU4F3Q15319 338 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 BTBD16Q32M84 506 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 CHRFAM7AQ494W8 412 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ZC3H12BQ5HYM0 836 aaKnown RBP6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 AARS2Q5JTZ9 985 aaKnown RBP6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 WASHC2DQ5SRD0 308 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 C10orf62Q5T681 223 aaPredicted RBP6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ANKRD22Q5VYY1 191 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 DUPD1Q68J44 220 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 C8orf74Q6P047 294 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 AFTPHQ6ULP2 937 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 FAM151BQ6UXP7 276 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 B3GNT6Q6ZMB0 384 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ZNF534Q76KX8 674 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 CAND1Q86VP6 1230 aaKnown RBP6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 SULF2Q8IWU5 870 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 LMNTD2Q8IXW0 634 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 MPP5Q8N3R9 675 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 OR5M9Q8NGP3 310 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PPP1R14CQ8TAE6 165 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 GABPB2Q8TAK5 448 aaPredicted RBP6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 LINC01560Q8TB33 94 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 HM13Q8TCT9 377 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 PERPQ96FX8 193 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 CDKN2AIPNLQ96HQ2 116 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 DNAJC1Q96KC8 554 aaKnown RBP6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 SELENOSQ9BQE4 189 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 OCSTAMPQ9BR26 566 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms