RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	ADNP	Q9H2P0	1102 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	TOR3A	Q9H497	397 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	FAM118A	Q9NWS6	357 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	MMP17	Q9ULZ9	603 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	DOLK	Q9UPQ8	538 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	NAALAD2	Q9Y3Q0	740 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	KRT87P	A6NCN2	255 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	LRAT	O95237	230 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	PAK4	O96013	591 aa	Predicted RBP	13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	SOD1	P00441	154 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	ABHD18	Q0P651	414 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	CSTF3	Q12996	717 aa	Known RBP	13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	IL18R1	Q13478	541 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	OXA1L	Q15070	435 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	CRTC3	Q6UUV7	619 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	ADAMTSL4	Q6UY14	1074 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	TMCO5A	Q8N6Q1	288 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	PIK3C3	Q8NEB9	887 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	VMP1	Q96GC9	406 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	REXO5	Q96IC2	774 aa	Known RBP	13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	MRGPRX1	Q96LB2	322 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	OSBPL10	Q9BXB5	764 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	GPRC5B	Q9NZH0	403 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	UTS2R	Q9UKP6	389 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	MRPS17	Q9Y2R5	130 aa	Known RBP	13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	PLXNA2	O75051	1894 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	SERPINA1	P01009	418 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	IL9	P15248	144 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	CDKN2C	P42773	168 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	CTSC	P53634	463 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	ADPRH	P54922	357 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	IRF8	Q02556	426 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	RFX4	Q33E94	735 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	FAM124A	Q86V42	546 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	HEATR4	Q86WZ0	1026 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	ADHFE1	Q8IWW8	467 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	C10orf111	Q8N326	155 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	PGBD3	Q8N328	593 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	NELL1	Q92832	810 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	EGLN2	Q96KS0	407 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	CSF3R	Q99062	836 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	PSD2	Q9BQI7	771 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	POLM	Q9NP87	494 aa	Predicted RBP	13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	WARS2	Q9UGM6	360 aa	Known RBP	13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	BAG5	Q9UL15	447 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	DUSP12	Q9UNI6	340 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614		A0A1W2PQU0	124 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	TCRBV21S2A2	A0A5A6	115 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	RFXANK	O14593	260 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	PRMT3	O60678	531 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	RNGTT	O60942	597 aa	Known RBP	13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	BCAS1	O75363	584 aa	Predicted RBP	13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	PSIP1	O75475	530 aa	Known RBP	13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	PRPS1L1	P21108	318 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	KIR3DL1	P43629	444 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	TRPC1	P48995	793 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	IST1	P53990	364 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	ABR	Q12979	859 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	MTAP	Q13126	283 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	LAPTM5	Q13571	262 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	AGER	Q15109	404 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	DPY19L1	Q2PZI1	675 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	WSCD2	Q2TBF2	565 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	OR4F3	Q6IEY1	312 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	THOC6	Q86W42	341 aa	Known RBP	13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	ZCCHC7	Q8N3Z6	543 aa	Known RBP	13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	OR5K1	Q8NHB7	308 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	ATL1	Q8WXF7	558 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	FOPNL	Q96NB1	174 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	FUNDC2	Q9BWH2	189 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	SMURF2	Q9HAU4	748 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	FBXL21	Q9UKT6	434 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	CA14	Q9ULX7	337 aa		13.35	□□□□□ -0.27
COPS7B-223	ENST00000611614	ARHGEF33	A8MVX0	844 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	B4GAT1	O43505	415 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	B3GALT4	O96024	378 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	CCDC159	P0C7I6	412 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	MYCLP1	P12525	358 aa	Predicted RBP	13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	PBLD	P30039	288 aa	Predicted RBP	13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	OPRL1	P41146	370 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	MAPK9	P45984	424 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	PPP2R2B	Q00005	443 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	SRSF11	Q05519	484 aa	Known RBP	13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	LRRC32	Q14392	662 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	DUOXA1	Q1HG43	343 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	BCL7A	Q4VC05	210 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	XKR6	Q5GH73	641 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	C1QTNF12	Q5T7M4	302 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	HORMAD1	Q86X24	394 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	SYT12	Q8IV01	421 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	PLA2G15	Q8NCC3	412 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	WDR20	Q8TBZ3	569 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	ZNF566	Q969W8	418 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	PYURF	Q96I23	114 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	ALPK1	Q96QP1	1244 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	MBOAT4	Q96T53	435 aa		13.34	□□□□□ -0.27
COPS7B-223	ENST00000611614	EBPL	Q9BY08	206 aa		13.34	□□□□□ -0.27

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